Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Parallel beta-helix repeat

Term: IPR006626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene166924 SustainPine v3.0 255
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6T4_PHYPA 4.0e-31
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Internal
sp_v3.0_unigene167204 SustainPine v3.0 363
AutoFact: Sugi basic protein n=2 Tax=Cryptomeria japonica RepID=SBP_CRYJA 6.0e-33
FL-Next: sp=Sugi basic protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene168171 SustainPine v3.0 279
AutoFact: Contains similarity to a polygalacturonase-like protein gi|7529266 from Arabidopsis thaliana BAC F18P9 gb|AL138654 and contains multiple polygalacturonase (pectinase) PF|00295 domains 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polygalacturonase 2.66e-19
Internal
sp_v3.0_unigene168693 SustainPine v3.0 335
AutoFact: FAP multi-domain protein 2.0e-16
Sma3: Glycine-rich protein 2.012e-11
coding
sp_v3.0_unigene169684 SustainPine v3.0 327
AutoFact: GRP multi-domain protein 3.0e-16
Sma3: Glycine-rich protein 2.897e-16
coding
sp_v3.0_unigene171386 SustainPine v3.0 283
AutoFact: Herpes_gp2 multi-domain protein 2.0e-14
Sma3: Glycine-rich protein 9.342e-12
coding
sp_v3.0_unigene171651 SustainPine v3.0 232
AutoFact: FAP multi-domain protein 2.0e-09
Sma3: Plus agglutinin 9.88e-10
coding
sp_v3.0_unigene173381 SustainPine v3.0 520
AutoFact: Gly_rich multi-domain protein 6.0e-19
Sma3: Putative glycine rich protein 3.78e-18
coding
sp_v3.0_unigene173563 SustainPine v3.0 343
AutoFact: Cell wall-anchored protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B873_9BACI 2.0e-06
Sma3: DNA-directed RNA polymerase 1.046e-11
coding
sp_v3.0_unigene183594 SustainPine v3.0 614
AutoFact: Extensin_2 multi-domain protein 4.0e-21
Sma3: Extensin 1.54143e-44
coding
sp_v3.0_unigene184901 SustainPine v3.0 764
AutoFact: pectate lyase 2 [Musa acuminata AAA Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene185122 SustainPine v3.0 481
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene187314 SustainPine v3.0 657
AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 2.287e-40
N-terminus
sp_v3.0_unigene188337 SustainPine v3.0 324
AutoFact: polygalacturonase [Eucalyptus globulus subsp. globulus] 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene188597 SustainPine v3.0 459
AutoFact: pectate lyase [Musa acuminata AAA Group] 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 2.304e-36
C-terminus
sp_v3.0_unigene189250 SustainPine v3.0 803
AutoFact: pectate lyase precursor [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene189522 SustainPine v3.0 619
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Ricinus communis RepID=B9RN02_RICCO 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
C-terminus
sp_v3.0_unigene191357 SustainPine v3.0 346
AutoFact: Collagen multi-domain protein 5.0e-12
Sma3: DNA-directed RNA polymerase 5.889e-14
coding
sp_v3.0_unigene193936 SustainPine v3.0 205
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6T4_PHYPA 2.0e-21
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Internal
sp_v3.0_unigene194393 SustainPine v3.0 316
AutoFact: Putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase n=3 Tax=Arabidopsis RepID=F4IFC5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain