Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Parallel beta-helix repeat

Term: IPR006626  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene97561 SustainPine v3.0 388
• AutoFact: Probable pectate lyase 22 n=2 Tax=Arabidopsis RepID=PLY22_ARATH 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene97797 SustainPine v3.0 1713
• AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Putative Complete
sp_v3.0_unigene98298 SustainPine v3.0 249
• AutoFact: FAP multi-domain protein 6.0e-17
• Sma3: Glycine-rich protein 5.691e-11
coding
sp_v3.0_unigene99510 SustainPine v3.0 690
• AutoFact: Glycosyl transferase family 1 protein n=3 Tax=Arabidopsis RepID=Q9LPN6_ARATH 1.0e-39
• FL-Next: tr=Glycosyl transferase family 1 protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: Glycosyltransferase family 4 protein 1.886e-07
C-terminus
sp_v3.0_unigene99799 SustainPine v3.0 714
• AutoFact: Putative pectate-lyase (Fragment) n=1 Tax=Capsicum annuum RepID=Q8S345_CAPAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene102646 SustainPine v3.0 1287
• AutoFact: Pectate lyase [Prunus mume] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene103285 SustainPine v3.0 1190
• AutoFact: putative pectate lyase [Arabidopsis thaliana] 2.0e-10
• FL-Next: tr=Cup s 1 pollen allergen; Cupressus sempervirens. 0.0
• Sma3: Pectate lyase, putative 1.629e-10
N-terminus
sp_v3.0_unigene103299 SustainPine v3.0 256
• AutoFact: Ripening-related pectate lyase n=1 Tax=Mangifera indica RepID=Q52PJ2_MANIN 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 2.071e-23
Putative C-terminus
sp_v3.0_unigene104021 SustainPine v3.0 453
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.243e-34
Internal
sp_v3.0_unigene104323 SustainPine v3.0 398
• AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 2.935e-24
Internal
sp_v3.0_unigene104626 SustainPine v3.0 418
• AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RZX1_RICCO 8.0e-25
• FL-Next: tr=Allergen Cry j 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Putative N-terminus
sp_v3.0_unigene105301 SustainPine v3.0 290
• AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene105450 SustainPine v3.0 686
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290 gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.761e-22
Internal
sp_v3.0_unigene105984 SustainPine v3.0 371
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 2.05e-07
Internal
sp_v3.0_unigene106630 SustainPine v3.0 401
• AutoFact: pfam01535, PPR, PPR repeat 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene107190 SustainPine v3.0 561
• AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 2.951e-35
N-terminus
sp_v3.0_unigene109420 SustainPine v3.0 510
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 2.0e-35
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene111138 SustainPine v3.0 442
• AutoFact: Polygalacturonase n=2 Tax=Cucumis RepID=E5GBI5_CUCME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 1.99e-26
Internal
sp_v3.0_unigene111361 SustainPine v3.0 458
• AutoFact: Pentatricopeptide repeat protein 43 n=1 Tax=Funaria hygrometrica RepID=F5CAD7_FUNHY 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.013e-20
Internal
sp_v3.0_unigene111889 SustainPine v3.0 427
• AutoFact: putative pectate-lyase [Capsicum annuum] 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pectate lyase 1.059e-28
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain