Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Parallel beta-helix repeat

Term: IPR006626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene75939 SustainPine v3.0 352
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1H2_RICCO 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 4.56e-15
Internal
sp_v3.0_unigene76754 SustainPine v3.0 254
AutoFact: Pectate lyase 1 n=2 Tax=Musa acuminata RepID=Q9SDW4_MUSAC 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 4.577e-22
Internal
sp_v3.0_unigene76995 SustainPine v3.0 252
AutoFact: Pectate lyase, putative n=1 Tax=Ricinus communis RepID=B9RWM7_RICCO 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene77349 SustainPine v3.0 362
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 8.978e-10
Internal
sp_v3.0_unigene77776 SustainPine v3.0 237
AutoFact: Pectate lyase n=7 Tax=Rosodae RepID=E3VSV6_9ROSA 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene77840 SustainPine v3.0 349
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 2.994e-09
Putative C-terminus
sp_v3.0_unigene77936 SustainPine v3.0 328
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Populus trichocarpa RepID=B9I985_POPTR 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Putative N-terminus
sp_v3.0_unigene78466 SustainPine v3.0 134
AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene78929 SustainPine v3.0 387
AutoFact: pectate lyase [Salix gilgiana] 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene79109 SustainPine v3.0 409
AutoFact: putative polygalacturonase [Arabidopsis thaliana] sp|Q94AJ5.1|PGLR5_ARATH RecName: Full=Probable polygalacturonase At1g80170; Short=PG; AltName: Full=Pectinase At1g80170; Flags: Precursor gb|AAK76676.1| putative polygalacturonase [Arabidopsis thaliana] gb 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 6.596e-14
Internal
sp_v3.0_unigene79274 SustainPine v3.0 341
AutoFact: pectate lyase B [Fragaria x ananassa] gb|AAZ31565.1| pectate lyase isoform 3 [Fragaria x ananassa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene79326 SustainPine v3.0 342
AutoFact: Pectate lyase 8 n=4 Tax=Zea mays RepID=B6SSS1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene79745 SustainPine v3.0 396
AutoFact: pectate lyase [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
Internal
sp_v3.0_unigene79900 SustainPine v3.0 185
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RDW4_RICCO 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene82435 SustainPine v3.0 361
AutoFact: FAP multi-domain protein 2.0e-17
Sma3: Putative glycine-rich cell wall structural protein 6.895e-10
coding
sp_v3.0_unigene85882 SustainPine v3.0 350
AutoFact: TT_ORF1 multi-domain protein 3.0e-09
coding
sp_v3.0_unigene93843 SustainPine v3.0 1909
AutoFact: Pectate lyase n=1 Tax=Dianthus caryophyllus RepID=D4QD73_DIACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene95255 SustainPine v3.0 635
AutoFact: Pectate lyase (Fragment) n=1 Tax=Glycine max RepID=A4GU25_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus
sp_v3.0_unigene96237 SustainPine v3.0 654
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.953e-18
Internal
sp_v3.0_unigene97516 SustainPine v3.0 1361
AutoFact: pectate lyase [Fragaria x ananassa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectate lyase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain