Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Endonuclease/exonuclease/phosphatase

Term: IPR005135  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6273 SustainPine v3.0 2140
AutoFact: putative RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6533 SustainPine v3.0 2922
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: KOB1 2.076e-09
Putative Complete
sp_v3.0_unigene6681 SustainPine v3.0 1006
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6684 SustainPine v3.0 1939
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9RQR6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin binding protein 1.378e-18
C-terminus
sp_v3.0_unigene6764 SustainPine v3.0 1766
AutoFact: cysteine proteinase-like protein [Arabidopsis thaliana] gb|AAF14829.1|AC011664_11 unknown protein [Arabidopsis thaliana] gb|AAS76700.1| At3g02070 [Arabidopsis thaliana] gb|AAS92324.1| At3g02070 [Arabidopsis thaliana] dbj|BAH20151.1| AT3G02070 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cysteine-type peptidase, putative 3.802e-15
Complete
sp_v3.0_unigene6824 SustainPine v3.0 2755
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 3.113e-18
Complete
sp_v3.0_unigene7003 SustainPine v3.0 1844
AutoFact: Os01g0689900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5N7Q8_ORYSJ 0.0
FL-Next: tr=(Rice Genome Annotation Project) OsWAK10a - OsWAK receptor-like cytoplasmic kinase; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Wall-associated kinase, putative 1.423e-18
Complete
sp_v3.0_unigene7275 SustainPine v3.0 2428
AutoFact: putative protein kinase; 23181-21271 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Wall-associated kinase, putative 3.065e-13
Putative Complete
sp_v3.0_unigene7336 SustainPine v3.0 2298
AutoFact: endonuclease/exonuclease/phosphatase-like protein [Arabidopsis thaliana] gb|AAD30241.1|AC007296_2 EST gb|F14156 comes from this gene [Arabidopsis thaliana] gb|AAM91094.1| At1g11800/F25C20_3 [Arabidopsis thaliana] gb|AAN18168.1| At1g11800/F25C20_3 [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7441 SustainPine v3.0 2596
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_91, whole genome shotgun sequence 9.171e-09
N-terminus
sp_v3.0_unigene7459 SustainPine v3.0 2724
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HECT 3.922e-09
Complete
sp_v3.0_unigene7468 SustainPine v3.0 3403
AutoFact: Trehalose 6-phosphate synthase n=3 Tax=Solanaceae RepID=D4QAK4_TOBAC 0.0
FL-Next: sp=Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Trehalose-6-phosphate synthase, putative 1.087e-09
Putative Complete
sp_v3.0_unigene7566 SustainPine v3.0 3108
AutoFact: putative prolyl endopeptidase [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Putative prolyl endopeptidase 9.548e-09
Complete
sp_v3.0_unigene7751 SustainPine v3.0 3545
AutoFact: Vacuolar sorting protein 39 [Arabidopsis thaliana] gb|AAM20730.1| unknown protein [Arabidopsis thaliana] gb|AEE86679.1| Vacuolar sorting protein 39 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene7765 SustainPine v3.0 1595
AutoFact: FAD/NAD(P)-binding oxidoreductase domain-containing protein [Arabidopsis thaliana] gb|AAF04895.1|AC011437_10 unknown protein [Arabidopsis thaliana] gb|AAK91359.1| AT3g04650/F7O18_13 [Arabidopsis thaliana] gb|AAO42761.1| At3g04650/F7O18_13 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7861 SustainPine v3.0 1347
AutoFact: Os01g0689900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5N7Q8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Wall-associated kinase, putative 5.108e-08
N-terminus
sp_v3.0_unigene7901 SustainPine v3.0 2212
AutoFact: Carbon catabolite repressor protein, putative n=1 Tax=Ricinus communis RepID=B9RMY1_RICCO 0.0
FL-Next: sp=Uncharacterized calcium-binding protein At1g02270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7999 SustainPine v3.0 1556
AutoFact: [A] COG5239 mRNA deadenylase, exonuclease subunit and related nucleases 3.0e-28
FL-Next: Isoform 2 of Carbon catabolite repressor protein 4 homolog 4 OS=Arabidopsis thaliana GN=CCR4-4 0.0
Complete
sp_v3.0_unigene8099 SustainPine v3.0 1554
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene8258 SustainPine v3.0 4353
AutoFact: Contains similarity to p60 katanin from Chlamydomonas reinhardtii gb|AF205377 and contains an AAA domain PF|00004 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule-severing protein katanin 60kDa subunit 2.459e-07
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain