Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Endonuclease/exonuclease/phosphatase

Term: IPR005135  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene130632 SustainPine v3.0 333
AutoFact: U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AED97425.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene131207 SustainPine v3.0 223
AutoFact: zinc finger protein [Arabidopsis thaliana] 3.0e-05
FL-Next: tr=Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ran GTPase binding protein, putative 6.016e-10
C-terminus
sp_v3.0_unigene131801 SustainPine v3.0 143
AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase receptor 4.769e-06
Internal
sp_v3.0_unigene131974 SustainPine v3.0 377
AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran GTPase binding protein, putative 6.388e-19
Putative C-terminus
sp_v3.0_unigene132465 SustainPine v3.0 487
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 4.467e-09
Internal
sp_v3.0_unigene132749 SustainPine v3.0 325
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 1.96182e-44
FL-Next: tr=U5 small nuclear ribonucleoprotein 200 kDa helicase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene132969 SustainPine v3.0 572
AutoFact: serine/threonine protein kinase, transcription repression [Chlamydomonas reinhardtii] gb|AAL60199.1|AF443205_1 serine/threonine protein kinase [Chlamydomonas reinhardtii] gb|EDP01578.1| serine/threonine protein kinase, transcription repression [Chlamydomo 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Casein kinase, putative 3.16e-16
C-terminus
sp_v3.0_unigene133282 SustainPine v3.0 388
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Casein kinase, putative 7.953e-16
Internal
sp_v3.0_unigene133612 SustainPine v3.0 656
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin binding protein 1.124e-20
Internal
sp_v3.0_unigene134869 SustainPine v3.0 264
AutoFact: carbon catabolite repressor protein 4-like 2 [Arabidopsis thaliana] sp|Q9M2F8.2|CCR4B_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 2; Short=CCR4 homolog 2 gb|AEE79801.1| carbon catabolite repressor protein 4-like 2 [Arabidopsis thalia 5.0e-22
FL-Next: sp=Carbon catabolite repressor protein 4 homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene135801 SustainPine v3.0 335
AutoFact: protein kinase-like protein [Arabidopsis thaliana] 5.0e-27
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Kinase, putative 1.258e-23
Internal
sp_v3.0_unigene135842 SustainPine v3.0 264
AutoFact: EVE domain containing protein 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene136187 SustainPine v3.0 206
AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene137179 SustainPine v3.0 201
AutoFact: protein of endonuclease / exonuclease / phosphatase family; K12603 CCR4-NOT transcription complex subunit 6 [EC:3.1.-.-] 4.0e-15
FL-Next: sp=Carbon catabolite repressor protein 4 homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene137565 SustainPine v3.0 475
AutoFact: vesicle-associated membrane protein 727 [Arabidopsis thaliana] ref|NP_001078283.1| vesicle-associated membrane protein 727 [Arabidopsis thaliana] sp|Q9M376.1|VA727_ARATH RecName: Full=Vesicle-associated membrane protein 727; Short=AtVAMP727 emb|CAB71004.1 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle-associated membrane protein, putative 5.329e-13
C-terminus
sp_v3.0_unigene137888 SustainPine v3.0 355
AutoFact: wall-associated kinase, putative [Arabidopsis thaliana] 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Wall-associated kinase, putative 8.154e-19
Internal
sp_v3.0_unigene138123 SustainPine v3.0 230
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710 emb|CAB66909.1| putative protein [Arabidopsis thaliana] gb|AEE78579.1| pentatricopeptide repeat- 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.811e-11
Internal
sp_v3.0_unigene139780 SustainPine v3.0 436
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 9.99967e-42
FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
Sma3: Gag-Pol polyprotein 4.218e-14
Internal
sp_v3.0_unigene140633 SustainPine v3.0 715
AutoFact: [U] COG5143 Synaptobrevin/VAMP-like protein 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle-associated membrane protein, putative 1.623e-15
C-terminus
sp_v3.0_unigene141014 SustainPine v3.0 871
AutoFact: RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I gb|AAB41401.1| topoisomerase I [Daucus carota] 2.0e-39
FL-Next: sp=DNA topoisomerase 1; Daucus carota (Carrot). 0.0
Sma3: Topoisomerase I 2.543e-25
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain