Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Proteasome, beta-type subunit, conserved site

Term: IPR016050  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene158689 SustainPine v3.0 405
• AutoFact: Cold shock protein (Beta-ribbon, CspA family) n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XMQ1_PSEFL 5.0e-27
• FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
N-terminus
sp_v3.0_unigene158701 SustainPine v3.0 603
• AutoFact: Proteasome subunit alpha type-3 (Fragment) n=1 Tax=Acanthamoeba castellanii RepID=PSA3_ACACA 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 4.226e-36
N-terminus
sp_v3.0_unigene158756 SustainPine v3.0 379
• AutoFact: Proteasome subunit beta type n=1 Tax=Eptatretus stoutii RepID=C9K0Z2_EPTST 1.0e-31
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158991 SustainPine v3.0 507
• AutoFact: Proteasome subunit beta type-5 n=2 Tax=Dictyostelium RepID=PSB5_DICDI 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type 5 1.949e-08
Putative N-terminus
sp_v3.0_unigene159056 SustainPine v3.0 280
• AutoFact: Proteasome subunit alpha type n=3 Tax=Agaricales RepID=B0D3V9_LACBS 2.0e-32
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 5.581e-38
N-terminus
sp_v3.0_unigene159061 SustainPine v3.0 295
• AutoFact: Proteasome subunit alpha type n=3 Tax=Physcomitrella patens subsp. patens RepID=A9T0H6_PHYPA 7.0e-34
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 0.0
N-terminus
sp_v3.0_unigene160240 SustainPine v3.0 277
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NKR6_PICSI 8.0e-16
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.247e-17
Internal
sp_v3.0_unigene190436 SustainPine v3.0 553
• AutoFact: Proteasome subunit (Fragment) n=1 Tax=Griffithsia japonica RepID=Q7XYA9_GRIJA 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-6 1.042e-07
N-terminus
sp_v3.0_unigene191488 SustainPine v3.0 406
• AutoFact: Proteasome subunit beta type 1 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q6R2_9MYCE 7.0e-24
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene191603 SustainPine v3.0 425
• AutoFact: Proteasome subunit beta type n=5 Tax=Euteleostei RepID=B5X8Y8_SALSA 2.0e-19
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-6 6.012e-08
N-terminus
sp_v3.0_unigene191665 SustainPine v3.0 705
• AutoFact: Proteasome subunit beta type n=2 Tax=Paramecium tetraurelia RepID=A0CXW8_PARTE 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-3 1.176e-08
C-terminus
sp_v3.0_unigene191841 SustainPine v3.0 721
• AutoFact: Proteasome subunit beta type-2 n=4 Tax=Poaceae RepID=PSB2_ORYSJ 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome chain protein 1.328e-08
Putative Complete
sp_v3.0_unigene192558 SustainPine v3.0 306
• AutoFact: Proteasome subunit beta type n=1 Tax=Ectocarpus siliculosus RepID=D8LRR1_ECTSI 3.0e-20
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene193178 SustainPine v3.0 306
• AutoFact: Proteasome subunit beta type n=1 Tax=Chlamydomonas reinhardtii RepID=A8J212_CHLRE 1.0e-26
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene200326 SustainPine v3.0 288
• AutoFact: Proteasome subunit beta type n=1 Tax=Naegleria gruberi RepID=D2VBJ0_NAEGR 1.0e-33
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene200447 SustainPine v3.0 344
• AutoFact: Proteasome subunit beta type n=1 Tax=Chlorella variabilis RepID=E1Z8Y2_9CHLO 2.0e-38
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit beta type-6 4.947e-08
C-terminus
sp_v3.0_unigene200536 SustainPine v3.0 310
• AutoFact: Proteasome subunit alpha type-4 (Fragment) n=4 Tax=Chromadorea RepID=F1LDS6_ASCSU 2.0e-33
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 6.305e-28
N-terminus
sp_v3.0_unigene208502 SustainPine v3.0 809
• AutoFact: Proteasome subunit beta type-3 n=2 Tax=Picea RepID=PSB3_PICMA 0.0
• FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene209704 SustainPine v3.0 1115
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NKR6_PICSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain