Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Proteasome, beta-type subunit, conserved site

Term: IPR016050  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene36656 SustainPine v3.0 1501
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NYS4_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene50792 SustainPine v3.0 980
AutoFact: Proteasome subunit alpha type n=1 Tax=Ricinus communis RepID=B9T3P0_RICCO 0.0
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 1.432e-30
Complete
sp_v3.0_unigene56456 SustainPine v3.0 157
AutoFact: Proteasome subunit beta type n=1 Tax=Branchiostoma floridae RepID=C3Z568_BRAFL 1.0e-18
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene60054 SustainPine v3.0 301
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NKT0_PICSI 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type, putative 8.437e-08
Internal
sp_v3.0_unigene63576 SustainPine v3.0 293
AutoFact: proteasome subunit beta type-5-B [Arabidopsis thaliana] sp|Q9LIP2.1|PSB5B_ARATH RecName: Full=Proteasome subunit beta type-5-B; AltName: Full=20S proteasome beta subunit E-2; AltName: Full=Proteasome epsilon-2 chain; Flags: Precursor gb|AAL27514.1|AF43984 2.0e-40
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type 5 1.408e-08
Internal
sp_v3.0_unigene65553 SustainPine v3.0 310
AutoFact: Proteasome subunit beta type-3 n=2 Tax=Picea RepID=PSB3_PICMA 2.0e-25
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type-3 4.891e-09
C-terminus
sp_v3.0_unigene68371 SustainPine v3.0 189
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene73981 SustainPine v3.0 361
AutoFact: Probable aquaporin n=2 Tax=Picea RepID=Q3ZDL5_PICAB 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cold shock domain protein 2 1.751e-08
C-terminus
sp_v3.0_unigene76525 SustainPine v3.0 277
AutoFact: Proteasome subunit beta type-6 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U198_9EUKA 2.0e-27
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type-6 1.037e-07
N-terminus
sp_v3.0_unigene77881 SustainPine v3.0 349
AutoFact: Proteasome subunit beta type n=4 Tax=Caenorhabditis RepID=Q966I8_CAEEL 5.0e-35
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene78889 SustainPine v3.0 366
AutoFact: Proteasome subunit beta type n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8PCK4_COPC7 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene79747 SustainPine v3.0 321
AutoFact: Proteasome subunit beta type n=1 Tax=Picea sitchensis RepID=A9NYV8_PICSI 2.0e-38
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type 7,10, putative 1.385e-08
Misassembled
sp_v3.0_unigene127400 SustainPine v3.0 783
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NKT0_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene127890 SustainPine v3.0 1249
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NYS4_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127937 SustainPine v3.0 986
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NLJ2_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene128057 SustainPine v3.0 679
AutoFact: Proteasome subunit beta type n=1 Tax=Picea sitchensis RepID=A9NMG7_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type-1 6.241e-12
N-terminus
sp_v3.0_unigene133345 SustainPine v3.0 409
AutoFact: Proteasome subunit beta type n=1 Tax=Picea sitchensis RepID=A9NKA9_PICSI 9.99967e-42
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type-4 2.194e-08
C-terminus
sp_v3.0_unigene136002 SustainPine v3.0 285
AutoFact: RecName: Full=Proteasome subunit beta type-5; AltName: Full=20S proteasome subunit E; AltName: Full=Proteasome epsilon chain; Flags: Precursor dbj|BAA21650.1| 26S proteasome beta subunit [Spinacia oleracea] 4.0e-37
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type 5 1.895e-08
Internal
sp_v3.0_unigene143556 SustainPine v3.0 464
AutoFact: Proteasome subunit beta type n=2 Tax=Picea sitchensis RepID=A9NYS4_PICSI 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene143902 SustainPine v3.0 997
AutoFact: Proteasome subunit beta type-3 n=2 Tax=Picea RepID=PSB3_PICMA 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain