Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chaperonin TCP-1, conserved site

Term: IPR002194  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene59344 SustainPine v3.0 389
• AutoFact: mitotic cyclin b1-type [Glycine max] 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: B-type cyclin 5.567e-24
Internal
sp_v3.0_unigene59903 SustainPine v3.0 305
• AutoFact: RVT_2 domain containing protein 8.0e-29
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Putative uncharacterized protein 9.904e-14
Internal
sp_v3.0_unigene59999 SustainPine v3.0 318
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Polyprotein 3.569e-11
Putative C-terminus
sp_v3.0_unigene60523 SustainPine v3.0 315
• AutoFact: T complex protein 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 2.662e-12
Putative N-terminus
sp_v3.0_unigene61139 SustainPine v3.0 136
• AutoFact: T-complex protein 1 subunit alpha n=1 Tax=Vitis vinifera RepID=A5B8L4_VITVI 6.0e-08
• FL-Next: sp=T-complex protein 1 subunit alpha; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: T-complex protein 1, alpha subunit 3.797e-15
Internal
sp_v3.0_unigene61304 SustainPine v3.0 335
• AutoFact: PREDICTED: similar to chaperonin n=1 Tax=Nasonia vitripennis RepID=UPI00015B57CA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1, alpha subunit 1.013e-39
Internal
sp_v3.0_unigene61312 SustainPine v3.0 218
• AutoFact: pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum 2.0e-24
• FL-Next: sp=Probable LRR receptor-like serine/threonine-protein kinase At1g56130; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP binding protein, putative 1.303e-06
Internal
sp_v3.0_unigene61594 SustainPine v3.0 331
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.681e-33
Internal
sp_v3.0_unigene61604 SustainPine v3.0 254
• AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB1 2.039e-26
Internal
sp_v3.0_unigene61721 SustainPine v3.0 369
• AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB2 2.968e-22
Internal
sp_v3.0_unigene61914 SustainPine v3.0 292
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.596e-32
Internal
sp_v3.0_unigene62233 SustainPine v3.0 314
• AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 4.74e-09
Putative N-terminus
sp_v3.0_unigene63068 SustainPine v3.0 195
• AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 1.0e-06
• FL-Next: tr=Cholesterol transport protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene63860 SustainPine v3.0 284
• AutoFact: S-receptor kinase, putative n=1 Tax=Ricinus communis RepID=B9RJ59_RICCO 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.16e-14
Internal
sp_v3.0_unigene63934 SustainPine v3.0 266
• AutoFact: Serine/threonine kinase n=12 Tax=Brassicaceae RepID=O04384_BRAOL 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 1.05e-13
Internal
sp_v3.0_unigene64716 SustainPine v3.0 239
• AutoFact: CRS2-associated factor 2 [Arabidopsis thaliana] sp|Q9LDA9.1|CAF2P_ARATH RecName: Full=CRS2-associated factor 2, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2; Flags: Precursor gb|AAF79596.1|AC007 8.0e-22
• FL-Next: sp=CRS2-associated factor 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 1.336e-12
Internal
sp_v3.0_unigene64897 SustainPine v3.0 154
• AutoFact: Orf490 protein n=4 Tax=Oryza RepID=Q8HCR1_ORYSJ 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.205e-36
Internal
sp_v3.0_unigene65476 SustainPine v3.0 384
• AutoFact: Chaperonin protein n=6 Tax=Poaceae RepID=Q6ASR1_ORYSJ 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene65597 SustainPine v3.0 262
• AutoFact: T-complex protein 1 subunit delta n=2 Tax=Selaginella moellendorffii RepID=D8QXT8_SELML 3.0e-21
• FL-Next: sp=T-complex protein 1 subunit delta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1, delta subunit 0.0
Internal
sp_v3.0_unigene66130 SustainPine v3.0 395
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10FX2_ORYSJ 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain