Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S27a

Term: IPR002906  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene65586 SustainPine v3.0 175
AutoFact: polyubiquitin [Pinus sylvestris] 1.0e-17
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene65600 SustainPine v3.0 242
AutoFact: [O] COG5272 Ubiquitin 2.0e-30
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 8.613e-08
Putative Complete
sp_v3.0_unigene65601 SustainPine v3.0 334
AutoFact: polyubiquitin OUB2 [Olea europaea] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65604 SustainPine v3.0 127
AutoFact: Ubiquitin-60S ribosomal protein L40 n=1 Tax=Trypanosoma cruzi RepID=RL402_TRYCR 3.0e-09
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 3.022e-10
Internal
sp_v3.0_unigene65605 SustainPine v3.0 281
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-40
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene65621 SustainPine v3.0 166
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 9.0e-15
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene65623 SustainPine v3.0 238
AutoFact: [O] COG5272 Ubiquitin 3.0e-37
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 2.3e-10
Putative Complete
sp_v3.0_unigene65637 SustainPine v3.0 116
AutoFact: Ubiquitin/actin fusion protein 2 n=7 Tax=Eukaryota RepID=Q7XBP8_BIGNA 1.0e-08
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 2 1.015e-07
Internal
sp_v3.0_unigene65640 SustainPine v3.0 274
AutoFact: polyubiquitin [Triticum aestivum] 2.99878e-43
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.465e-08
Putative Complete
sp_v3.0_unigene65704 SustainPine v3.0 210
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 9.0e-31
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene65705 SustainPine v3.0 130
AutoFact: [O] COG5272 Ubiquitin 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65708 SustainPine v3.0 191
AutoFact: polyubiquitin [Sclerotinia sclerotiorum 1980] gb|EDN90771.1| polyubiquitin [Sclerotinia sclerotiorum 1980 UF-70] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65710 SustainPine v3.0 249
AutoFact: [O] COG5272 Ubiquitin 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65713 SustainPine v3.0 160
AutoFact: [O] COG5272 Ubiquitin 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65714 SustainPine v3.0 140
AutoFact: ubiquitin K48R [synthetic construct] 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65732 SustainPine v3.0 179
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 6.0e-19
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin 2.702e-07
C-terminus
sp_v3.0_unigene65734 SustainPine v3.0 166
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 4.0e-14
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative C-terminus
sp_v3.0_unigene65752 SustainPine v3.0 224
AutoFact: Ubiquitin extension protein n=1 Tax=Capsicum annuum RepID=A0MKC8_CAPAN 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65761 SustainPine v3.0 260
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65765 SustainPine v3.0 126
AutoFact: [O] COG5272 Ubiquitin 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain