Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S27a

Term: IPR002906  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene61719 SustainPine v3.0 192
AutoFact: poly-histidine-tagged ubiquitin [Cloning vector pHUE] 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene61738 SustainPine v3.0 187
AutoFact: [O] COG5272 Ubiquitin 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene62454 SustainPine v3.0 152
AutoFact: putative polyubiquitin [Arabidopsis thaliana] 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene62770 SustainPine v3.0 222
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 1.0e-32
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene62916 SustainPine v3.0 282
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 1.0e-35
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 4.039e-07
Putative N-terminus
sp_v3.0_unigene65444 SustainPine v3.0 104
AutoFact: Ubiquitin/ribosomal fusion protein n=2 Tax=core eudicotyledons RepID=D5LY07_PONTR 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65454 SustainPine v3.0 150
AutoFact: 60S ribosomal protein L40 n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SBB4_BOTFB 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65462 SustainPine v3.0 370
AutoFact: ubiquitin [Solanum lycopersicum] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene65471 SustainPine v3.0 180
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65483 SustainPine v3.0 292
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene65490 SustainPine v3.0 113
AutoFact: Ubiquitin n=2 Tax=Dictyosteliida RepID=D3AVZ4_POLPA 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 2 1.021e-07
Internal
sp_v3.0_unigene65504 SustainPine v3.0 121
AutoFact: ubiquitin precursor [Musa acuminata AAA Group] 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65507 SustainPine v3.0 168
AutoFact: ubiquitin extension protein [Capsicum annuum] 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene65510 SustainPine v3.0 122
AutoFact: Ubiquitin/actin fusion protein 2 n=7 Tax=Eukaryota RepID=Q7XBP8_BIGNA 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 2 1.021e-07
Internal
sp_v3.0_unigene65513 SustainPine v3.0 155
AutoFact: Probable ubiquitin n=1 Tax=Sporisorium reilianum RepID=E6ZP21_9BASI 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 1.248e-07
Internal
sp_v3.0_unigene65516 SustainPine v3.0 204
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 3.0e-24
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene65543 SustainPine v3.0 213
AutoFact: Probable ubiquitin n=1 Tax=Sporisorium reilianum RepID=E6ZP21_9BASI 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65551 SustainPine v3.0 284
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 8.0e-30
FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Complete
sp_v3.0_unigene65569 SustainPine v3.0 97
AutoFact: Ubiquitin n=1 Tax=Riftia pachyptila RepID=B0B068_RIFPA 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65575 SustainPine v3.0 160
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 6.0e-13
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.033e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain