Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S27a

Term: IPR002906  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene165854 SustainPine v3.0 431
AutoFact: Polyubiquitin 2 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00UH7_OSTTA 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 1.381e-09
Complete
sp_v3.0_unigene166732 SustainPine v3.0 523
AutoFact: Probable ubiquitin/ribosomal protein S27a fusion protein n=2 Tax=Ustilaginaceae RepID=E6ZP53_9BASI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin extension protein 0.0
Complete
sp_v3.0_unigene166765 SustainPine v3.0 265
AutoFact: Probable ubiquitin/ribosomal protein S27a fusion protein n=2 Tax=Ustilaginaceae RepID=E6ZP53_9BASI 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S27a 2.046e-06
Internal
sp_v3.0_unigene167332 SustainPine v3.0 263
AutoFact: ubiquitin [Musa acuminata AAA Group] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene167680 SustainPine v3.0 198
AutoFact: Ubiquitin, putative n=5 Tax=Chromadorea RepID=A8NSV0_BRUMA 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene190036 SustainPine v3.0 470
AutoFact: ubiquitin [Dictyostelium discoideum] 2.0e-11
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
N-terminus
sp_v3.0_unigene190538 SustainPine v3.0 174
AutoFact: Ubiquitin n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RJC6_PLAYO 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene202476 SustainPine v3.0 536
AutoFact: Ubiquitin n=2 Tax=Suberites domuncula RepID=O96951_SUBDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin extension protein 0.0
Complete
sp_v3.0_unigene202736 SustainPine v3.0 398
AutoFact: Ubiquitin/ribosomal fusion protein n=2 Tax=Ajellomyces dermatitidis RepID=F2TQT1_AJEDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 2.38e-09
C-terminus
sp_v3.0_unigene202887 SustainPine v3.0 444
AutoFact: Ubiquitin-60S ribosomal protein L40 n=93 Tax=Eukaryota RepID=RL40_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene203071 SustainPine v3.0 451
AutoFact: Ubiquitin fusion protein, putative n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5P0K1_COCP7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CEP52 3.194e-07
Putative Complete
sp_v3.0_unigene203738 SustainPine v3.0 273
AutoFact: Ubiquitin, putative n=2 Tax=Eukaryota RepID=D0NEJ7_PHYIT 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene203917 SustainPine v3.0 380
AutoFact: Ubiquitin/ribosomal fusion protein n=2 Tax=Ajellomyces dermatitidis RepID=F2TQT1_AJEDE 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CEP52 3.367e-07
C-terminus
sp_v3.0_unigene204443 SustainPine v3.0 275
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYS0_TRISP 4.99983e-42
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene205028 SustainPine v3.0 288
AutoFact: Ubiquitin n=2 Tax=Ciona RepID=Q8MY15_CIOSA 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene205715 SustainPine v3.0 511
AutoFact: ubiquitin fusion protein [Sclerotinia sclerotiorum 1980] gb|EDN96945.1| ubiquitin fusion protein [Sclerotinia sclerotiorum 1980 UF-70] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene206625 SustainPine v3.0 379
AutoFact: Ubiquitin/ribosomal fusion protein n=1 Tax=Loa loa RepID=E1FY98_LOALO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene206756 SustainPine v3.0 488
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 1.0e-30
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene208166 SustainPine v3.0 123
AutoFact: ORF MSV144 putative ubiquitin, similar to Neurospora crassa GB:U01220 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVU8_MSEPV 1.0e-11
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene208487 SustainPine v3.0 816
AutoFact: Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.764e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain