Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S27a

Term: IPR002906  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene147690 SustainPine v3.0 768
AutoFact: Ubiquitin [Medicago truncatula] 1.0e-36
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative N-terminus
sp_v3.0_unigene148448 SustainPine v3.0 288
AutoFact: ubiquitin extension protein [Capsicum annuum] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene148683 SustainPine v3.0 118
AutoFact: [O] COG5272 Ubiquitin 4.0e-15
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative C-terminus
sp_v3.0_unigene149288 SustainPine v3.0 134
AutoFact: ubiquitin C variant [Homo sapiens] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene150372 SustainPine v3.0 210
AutoFact: Ubiquitin n=2 Tax=Ciona RepID=Q8MY15_CIOSA 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene150493 SustainPine v3.0 203
AutoFact: Polyubiquitin 5 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BYC3_9EUKA 9.0e-24
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin 1.963e-07
Putative C-terminus
sp_v3.0_unigene150597 SustainPine v3.0 144
AutoFact: Ubiquitin family n=1 Tax=Ruminococcus albus 8 RepID=E9S7A1_RUMAL 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polyubiquitin 5.096e-06
Internal
sp_v3.0_unigene151056 SustainPine v3.0 422
AutoFact: Polyubiquitin (Fragment) n=10 Tax=Eukaryota RepID=Q867Z6_9EUKA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 2.13e-08
Putative Complete
sp_v3.0_unigene151862 SustainPine v3.0 225
AutoFact: Ubiquitin extension protein putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WK76_9STRA 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene152086 SustainPine v3.0 338
AutoFact: nuclear protein [Coprinopsis cinerea okayama7#130] gb|EAU88610.1| nuclear protein [Coprinopsis cinerea okayama7#130] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 3.7e-08
C-terminus
sp_v3.0_unigene152263 SustainPine v3.0 373
AutoFact: ubiquitin/ribosomal protein L40 fusion protein [Dictyostelium discoideum AX4] sp|P14794.2|RL40_DICDI RecName: Full=Ubiquitin-60S ribosomal protein L40; AltName: Full=Ubiquitin A-52 residue ribosomal protein fusion product 1; Contains: RecName: Full=Ubiqui 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene152424 SustainPine v3.0 461
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.085e-07
Putative Complete
sp_v3.0_unigene153036 SustainPine v3.0 348
AutoFact: PREDICTED: ubiquitin-like, partial n=1 Tax=Callithrix jacchus RepID=UPI0001D37F0D 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene153365 SustainPine v3.0 258
AutoFact: Ubiquitin extension protein n=1 Tax=Capsicum annuum RepID=A0MKC8_CAPAN 2.0e-13
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene153576 SustainPine v3.0 248
AutoFact: Ubiquitin-40S ribosomal protein S27a n=60 Tax=Eumetazoa RepID=RS27A_DROME 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene154327 SustainPine v3.0 279
AutoFact: PREDICTED: polyubiquitin-like n=1 Tax=Pan troglodytes RepID=UPI00020E4C70 6.0e-40
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 2.368e-10
Putative Complete
sp_v3.0_unigene154376 SustainPine v3.0 159
AutoFact: Ubiquitin n=1 Tax=Euproctis pseudoconspersa nucleopolyhedrovirus RepID=C3TWV6_9ABAC 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene154474 SustainPine v3.0 155
AutoFact: Ubiquitin n=1 Tax=Metarhizium acridum CQMa 102 RepID=E9DYE5_METAQ 1.0e-19
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 3.813e-07
Putative N-terminus
sp_v3.0_unigene154776 SustainPine v3.0 117
AutoFact: ubiquitin C variant [Homo sapiens] 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene154789 SustainPine v3.0 351
AutoFact: Ribosomal protein S27a, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gb|ABO96912.1| Ribosomal protein S27a, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain