Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S27a

Term: IPR002906  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene79227 SustainPine v3.0 256
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene79333 SustainPine v3.0 360
AutoFact: Ubiquitin [Medicago truncatula] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene79640 SustainPine v3.0 162
AutoFact: [O] COG5272 Ubiquitin 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene79694 SustainPine v3.0 229
AutoFact: ubiquitin [Solanum lycopersicum] 4.0e-29
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.073e-07
Putative Complete
sp_v3.0_unigene80048 SustainPine v3.0 149
AutoFact: polyubiquitin [Triticum aestivum] 3.0e-19
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 4.105e-07
Putative N-terminus
sp_v3.0_unigene80179 SustainPine v3.0 174
AutoFact: [O] COG5272 Ubiquitin 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80721 SustainPine v3.0 234
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYQ3_TRISP 8.0e-35
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene81538 SustainPine v3.0 144
AutoFact: Polyubiquitin n=1 Tax=Lilium longiflorum RepID=Q9SEK7_LILLO 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene96846 SustainPine v3.0 1597
AutoFact: Polyubiquitin-C n=2 Tax=Sus scrofa RepID=UBC_PIG 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.816e-08
N-terminus
sp_v3.0_unigene102669 SustainPine v3.0 337
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene105187 SustainPine v3.0 132
AutoFact: Ubiquitin/actin fusion protein 2 n=7 Tax=Eukaryota RepID=Q7XBP8_BIGNA 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene105382 SustainPine v3.0 186
AutoFact: [O] COG5272 Ubiquitin 6.0e-26
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene110377 SustainPine v3.0 110
AutoFact: Ubiquitin n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TWA7_ACIAC 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene114123 SustainPine v3.0 181
AutoFact: [O] COG5272 Ubiquitin 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene124145 SustainPine v3.0 130
AutoFact: ubiquitin precursor [Hevea brasiliensis] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene124147 SustainPine v3.0 125
AutoFact: [O] COG5272 Ubiquitin 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene124173 SustainPine v3.0 193
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene124219 SustainPine v3.0 508
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 4.476e-07
Putative Complete
sp_v3.0_unigene126233 SustainPine v3.0 1012
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.687e-08
Complete
sp_v3.0_unigene126739 SustainPine v3.0 1328
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bi-ubiquitin 1.738e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain