Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Cytochrome c domain

Term: IPR009056  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75213 SustainPine v3.0 372
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 2.0e-38
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Misassembled
sp_v3.0_unigene81151 SustainPine v3.0 265
• AutoFact: Cytochrome c C1 n=2 Tax=Agaricomycetes RepID=B0D4B4_LACBS 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 0.0
Putative N-terminus
sp_v3.0_unigene83329 SustainPine v3.0 204
• AutoFact: Cytochrome c1, heme protein, mitochondrial n=20 Tax=Eukaryota RepID=CY1_HUMAN 4.0e-05
coding
sp_v3.0_unigene106465 SustainPine v3.0 231
• AutoFact: Cytochrome c n=21 Tax=Euteleostomi RepID=CYC_HUMAN 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 0.0
Putative N-terminus
sp_v3.0_unigene106871 SustainPine v3.0 150
• AutoFact: Cytochrome f (Fragment) n=9 Tax=core eudicotyledons RepID=A9QC51_TRACE 3.0e-09
• FL-Next: sp=Apocytochrome f; Picea sitchensis (Sitka spruce) (Pinus sitchensis). Plastid; Chloroplast. 0.0
• Sma3: Apocytochrome f 0.0
C-terminus
sp_v3.0_unigene112126 SustainPine v3.0 399
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene119885 SustainPine v3.0 1655
• AutoFact: cytochrome c1 precursor [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene140616 SustainPine v3.0 731
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene151578 SustainPine v3.0 445
• AutoFact: Serine hydroxymethyltransferase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=GLYA_CELJU 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene151775 SustainPine v3.0 498
• AutoFact: Serine hydroxymethyltransferase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y594_PHATC 2.99878e-43
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene152047 SustainPine v3.0 432
• AutoFact: Cytochrome c n=1 Tax=Phytophthora infestans T30-4 RepID=D0NKY1_PHYIT 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 0.0
C-terminus
sp_v3.0_unigene153551 SustainPine v3.0 305
• AutoFact: Cytochrome c n=1 Tax=Schistocerca gregaria RepID=CYC_SCHGR 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 0.0
Putative Complete
sp_v3.0_unigene154770 SustainPine v3.0 341
• AutoFact: Cytochrome c n=1 Tax=Polysphondylium pallidum RepID=D3B0E6_POLPA 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 0.0
C-terminus
sp_v3.0_unigene155110 SustainPine v3.0 279
• AutoFact: PREDICTED: cytochrome c, somatic-like n=1 Tax=Oryctolagus cuniculus RepID=UPI0001CE0B64 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 4.901e-12
N-terminus
sp_v3.0_unigene155333 SustainPine v3.0 425
• AutoFact: Cytochrome c n=1 Tax=Dictyostelium fasciculatum RepID=F4PHG4_9MYCE 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c 0.0
Complete
sp_v3.0_unigene156680 SustainPine v3.0 477
• AutoFact: cytochrome c1 [Dictyostelium discoideum AX4] sp|Q54D07.1|CY1_DICDI RecName: Full=Cytochrome c1, heme protein, mitochondrial; Short=Cytochrome c-1; AltName: Full=Complex III subunit 4; AltName: Full=Complex III subunit IV; AltName: Full=Cytochrome b-c1 com 8.00141e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c1 3.796e-19
C-terminus
sp_v3.0_unigene157330 SustainPine v3.0 479
• AutoFact: Serine hydroxymethyltransferase n=1 Tax=Dictyostelium purpureum RepID=F0ZDZ0_DICPU 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene157433 SustainPine v3.0 258
• AutoFact: Ubiquinol cytochrome c reductase cytochrome c1 prec (ISS) n=1 Tax=Ectocarpus siliculosus RepID=D7FVX8_ECTSI 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene158775 SustainPine v3.0 424
• AutoFact: cytochrome c1, mitochondrial precursor [Neurospora crassa OR74A] gb|EAA34520.1| cytochrome c1, mitochondrial precursor [Neurospora crassa OR74A] 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene159415 SustainPine v3.0 483
• AutoFact: Putative serine hydroxymethyltransferase, mitochondrial n=2 Tax=Sordariaceae RepID=GLYM_NEUCR 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain