Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain

Term: IPR002130  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene94609 SustainPine v3.0 613
AutoFact: Cyclophilin 59 n=4 Tax=Arabidopsis RepID=Q6Q151_ARATH 2.0e-08
FL-Next: tr=Cyclophilin 59; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene99433 SustainPine v3.0 1634
AutoFact: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] ref|NP_974240.1| Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] ref|NP_974241.1| Cyclophilin-like peptidyl-prolyl cis-tr 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene99466 SustainPine v3.0 946
AutoFact: Peptidyl-prolyl cis-trans isomerase CYP40 [Arabidopsis thaliana] sp|Q9C566.1|CYP40_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP40; Short=PPIase CYP40; AltName: Full=Cyclophilin of 40 kDa; Short=Cyclophilin-40; AltName: Full=Protein SQUINT; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene100286 SustainPine v3.0 484
AutoFact: cyclophilin-like peptidyl-prolyl cis-trans isomerase-like protein [Arabidopsis thaliana] gb|AEE35545.1| cyclophilin-like peptidyl-prolyl cis-trans isomerase-like protein [Arabidopsis thaliana] 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene100325 SustainPine v3.0 424
AutoFact: Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U572_VITVI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene103017 SustainPine v3.0 624
AutoFact: cyclophilin 59 [Arabidopsis thaliana] gb|AAS75309.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|AEE32989.1| cyclophilin 59 [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene105224 SustainPine v3.0 144
AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 1.0e-08
FL-Next: Isoform 3 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Internal
sp_v3.0_unigene109798 SustainPine v3.0 443
AutoFact: [R] COG2319 FOG: WD40 repeat 5.0e-18
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type 5.926e-07
Internal
sp_v3.0_unigene119809 SustainPine v3.0 352
AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Entamoeba RepID=B0ET56_ENTDI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative N-terminus
sp_v3.0_unigene124460 SustainPine v3.0 265
AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 9.0e-27
FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ultraviolet hypersensitive 1 3.343e-09
Internal
sp_v3.0_unigene127301 SustainPine v3.0 647
AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene127330 SustainPine v3.0 1359
AutoFact: FK506 binding-like protein n=5 Tax=Picea sitchensis RepID=A9P2H9_PICSI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rotamase 1.178e-16
Complete
sp_v3.0_unigene132428 SustainPine v3.0 334
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NK21_PICSI 2.0e-34
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene133185 SustainPine v3.0 400
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NNI6_PICSI 6.0e-33
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 1.559e-34
N-terminus
sp_v3.0_unigene140877 SustainPine v3.0 554
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NK21_PICSI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Misassembled
sp_v3.0_unigene142238 SustainPine v3.0 178
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NK21_PICSI 5.0e-20
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene143356 SustainPine v3.0 1621
AutoFact: Peptidyl-prolyl cis-trans isomerase, putative n=1 Tax=Ricinus communis RepID=B9RP81_RICCO 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase 9.698e-09
Putative C-terminus
sp_v3.0_unigene144850 SustainPine v3.0 550
AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Putative Complete
sp_v3.0_unigene145187 SustainPine v3.0 585
AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene146030 SustainPine v3.0 590
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cryptomeria japonica RepID=Q1XG52_CRYJA 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain