Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: DNA-directed RNA polymerase, subunit K/RPABC2

Term: IPR006111  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1497 SustainPine v3.0 1437
AutoFact: DNA-directed RNA polymerase IIa [Nicotiana tabacum] gb|AAD34614.1|AF153278_1 DNA-directed RNA polymerase IIb [Nicotiana tabacum] 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1925 SustainPine v3.0 1363
AutoFact: RNA polymerase Rpb6 [Arabidopsis thaliana] gb|AAK44116.1|AF370301_1 putative DNA-directed RNA polymerase II subunit [Arabidopsis thaliana] dbj|BAB11042.1| DNA-directed RNA polymerase II subunit-like protein [Arabidopsis thaliana] gb|AAL34262.1| putative D 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene24479 SustainPine v3.0 497
AutoFact: DNA-directed RNA polymeraseI n=4 Tax=Culicidae RepID=B0XGQ1_CULQU 1.0e-35
FL-Next: tr=DNAdirected RNA polymerase I putative; Albugo laibachii Nc14. 0.0
Complete
sp_v3.0_unigene27998 SustainPine v3.0 630
AutoFact: Class III homeodomain leucine zipper protein n=2 Tax=Pinaceae RepID=E7DX27_PICGL 0.0
FL-Next: tr=Class III homeodomain leucine zipper protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 2.765e-33
N-terminus
sp_v3.0_unigene32188 SustainPine v3.0 958
AutoFact: DNA-directed RNA polymerase, 14 to 18 kDa subunit [Medicago truncatula] 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene59151 SustainPine v3.0 450
AutoFact: Homeobox domain containing protein 5.0e-09
FL-Next: tr=Class III homeodomain-leucine zipper protein C3HDZ1; Taxus globosa. 0.0
Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 2.864e-33
Internal
sp_v3.0_unigene140731 SustainPine v3.0 558
AutoFact: DNA-directed RNA polymerase IIa [Nicotiana tabacum] gb|AAD34614.1|AF153278_1 DNA-directed RNA polymerase IIb [Nicotiana tabacum] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene158954 SustainPine v3.0 237
AutoFact: DNA-directed RNA polymerase IIa [Nicotiana tabacum] gb|AAD34614.1|AF153278_1 DNA-directed RNA polymerase IIb [Nicotiana tabacum] 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative DNA-directed RNA polymerase Iia 1.251e-08
C-terminus
sp_v3.0_unigene165588 SustainPine v3.0 482
AutoFact: DNA-directed RNA polymerases I n=2 Tax=Pyrenophora RepID=B2WBI5_PYRTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative DNA-directed RNA polymerase II subunit 1.013e-08
C-terminus
sp_v3.0_unigene208653 SustainPine v3.0 291
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain