Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal

Term: IPR000449  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene104231 SustainPine v3.0 294
• AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 6.0e-12
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104293 SustainPine v3.0 298
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 4.0e-11
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104436 SustainPine v3.0 367
• AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9SN70_RICCO 9.0e-32
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA repair helicase rad5,16, putative 1.361e-07
Internal
sp_v3.0_unigene104474 SustainPine v3.0 520
• AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA repair helicase rad5,16, putative 2.361e-07
Internal
sp_v3.0_unigene105377 SustainPine v3.0 505
• AutoFact: SEC-C motif-containing protein / OTU-like cysteine protease family protein [Arabidopsis thaliana] gb|AED98309.1| SEC-C motif-containing protein / OTU-like cysteine protease family protein [Arabidopsis thaliana] 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene107923 SustainPine v3.0 299
• AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAY34175.1| At2g12550 [Arabidopsis thaliana] gb|AEC06204.1| ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] 3.0e-15
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene108514 SustainPine v3.0 427
• AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 2.923e-18
Internal
sp_v3.0_unigene109061 SustainPine v3.0 141
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 5.0e-10
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene119349 SustainPine v3.0 281
• AutoFact: ubiquitin-protein ligase 2 [Arabidopsis thaliana] 3.0e-10
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123529 SustainPine v3.0 196
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 7.0e-16
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123678 SustainPine v3.0 175
• AutoFact: Ubiquitin-protein ligase, UPL1 n=2 Tax=Selaginella moellendorffii RepID=D8T159_SELML 3.0e-14
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 6.584e-09
Internal
sp_v3.0_unigene126868 SustainPine v3.0 483
• AutoFact: Ubiquitin carrier protein n=1 Tax=Yarrowia lipolytica CLIB122 RepID=Q6C907_YARLI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene127182 SustainPine v3.0 692
• AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 0.0
• FL-Next: sp=Nascent polypeptide-associated complex subunit alpha-like protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: Alpha-NAC-like protein 0.0
Putative Complete
sp_v3.0_unigene127411 SustainPine v3.0 867
• AutoFact: Ubiquitin carrier protein n=13 Tax=Tracheophyta RepID=Q69JN7_ORYSJ 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative Complete
sp_v3.0_unigene128313 SustainPine v3.0 882
• AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
• FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
• Sma3: Uv excision repair protein rad23, putative 2.601e-11
C-terminus
sp_v3.0_unigene129172 SustainPine v3.0 320
• AutoFact: Ubiquitin-protein ligase, UPL1 n=2 Tax=Selaginella moellendorffii RepID=D8T159_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 8.085e-09
Internal
sp_v3.0_unigene130587 SustainPine v3.0 437
• AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 3.0e-21
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 7.581e-10
Internal
sp_v3.0_unigene130863 SustainPine v3.0 185
• AutoFact: ubiquitin-protein ligase 2 [Arabidopsis thaliana] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 8.71e-09
Internal
sp_v3.0_unigene131852 SustainPine v3.0 255
• AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 2.0e-13
• FL-Next: sp=Nascent polypeptide-associated complex subunit alpha-like protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: Nascent polypeptide-associated complex subunit alpha-like protein 3.922e-09
C-terminus
sp_v3.0_unigene144652 SustainPine v3.0 400
• AutoFact: Ubiquitin carrier protein n=1 Tax=Sorghum bicolor RepID=C5XGM7_SORBI 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 3.401e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain