Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene74136
|
SustainPine v3.0
|
310
|
• AutoFact: Nascent polypeptide-associated complex subunit alpha n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NH82_COPC7
|
4.0e-24
|
• FL-Next: sp=Nascent polypeptide-associated complex subunit alpha-like protein; Pinus taeda (Loblolly pine).
|
0.0
|
|
C-terminus
|
sp_v3.0_unigene75788
|
SustainPine v3.0
|
471
|
• AutoFact: ubiquitin-protein ligase [Cryptococcus neoformans var. neoformans JEC21] ref|XP_772541.1| hypothetical protein CNBL0210 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL17894.1| hypothetical protein CNBL0210 [Cryptococcus neoformans var. neoformans
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: E3 ubiquitin protein ligase upl2, putative
|
7.067e-09
|
|
Internal
|
sp_v3.0_unigene76550
|
SustainPine v3.0
|
229
|
• AutoFact: uv excision repair protein rhp23 [Cryptococcus neoformans var. neoformans JEC21] gb|AAW41281.1| uv excision repair protein rhp23, putative [Cryptococcus neoformans var. neoformans JEC21]
|
8.0e-15
|
• FL-Next: tr=RAD23; Pinus sylvestris var. mongolica.
|
0.0
|
|
Internal
|
sp_v3.0_unigene76987
|
SustainPine v3.0
|
190
|
• AutoFact: Ubiquitin carrier protein (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR0_HYAOR
|
4.0e-16
|
• FL-Next: tr=Ubiquitin-conjugating enzyme UBC1; Picea abies (Norway spruce) (Picea excelsa).
|
0.0
|
• Sma3: Ubiquitin carrier protein
|
0.0
|
|
Misassembled
|
sp_v3.0_unigene77383
|
SustainPine v3.0
|
376
|
• AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO
|
2.0e-11
|
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
• Sma3: E3 ubiquitin protein ligase upl2, putative
|
6.584e-09
|
|
C-terminus
|
sp_v3.0_unigene77504
|
SustainPine v3.0
|
211
|
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB
|
4.0e-16
|
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
sp_v3.0_unigene78628
|
SustainPine v3.0
|
253
|
• AutoFact: Alpha chain of nascent polypeptide associated complex n=2 Tax=Solanaceae RepID=A2PYH3_NICBE
|
8.0e-12
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Nascent polypeptide-associated complex subunit alpha-like protein
|
9.453e-09
|
|
C-terminus
|
sp_v3.0_unigene79382
|
SustainPine v3.0
|
177
|
• AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana]
|
1.0e-05
|
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
• Sma3: E3 ubiquitin protein ligase upl2, putative
|
8.772e-06
|
|
Internal
|
sp_v3.0_unigene80038
|
SustainPine v3.0
|
190
|
• AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAF40452.1|AC004809_10 ESTs gb|N65605, gb|N38087, gb|T20485, gb|T13726, gb|N38339, gb|F15440 and gb|N97201 come from this gene [Arabidopsis thaliana] gb|AAL32687.1| Unknow
|
4.0e-07
|
• FL-Next: tr=Os02g0504500 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
Internal
|
sp_v3.0_unigene80058
|
SustainPine v3.0
|
180
|
• AutoFact: putative helicase [Oryza sativa Japonica Group]
|
2.0e-24
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
• Sma3: Putative RNA helicase A
|
3.02e-11
|
|
Internal
|
sp_v3.0_unigene80848
|
SustainPine v3.0
|
172
|
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB
|
4.0e-09
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
Internal
|
sp_v3.0_unigene85799
|
SustainPine v3.0
|
403
|
• AutoFact: PREDICTED: similar to Ca/calmodulin-dependent protein kinase phosphatase-N [Nasonia vitripennis]
|
6.0e-06
|
• Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed
|
1.276e-12
|
|
coding
|
sp_v3.0_unigene97259
|
SustainPine v3.0
|
345
|
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group]
|
1.0e-07
|
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
sp_v3.0_unigene99105
|
SustainPine v3.0
|
529
|
• AutoFact: SNF2 domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MP52_ARALL
|
6.0e-11
|
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
• Sma3: DNA repair helicase rad5,16, putative
|
2.435e-07
|
|
C-terminus
|
sp_v3.0_unigene99168
|
SustainPine v3.0
|
1143
|
• AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA
|
0.0
|
• FL-Next: sp=Nascent polypeptide-associated complex subunit alpha-like protein; Pinus taeda (Loblolly pine).
|
0.0
|
• Sma3: Alpha-NAC-like protein
|
0.0
|
|
Complete
|
sp_v3.0_unigene99512
|
SustainPine v3.0
|
640
|
• AutoFact: PREDICTED: similar to ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome), partial [Strongylocentrotus purpuratus] ref|XP_780810.2| PREDICTED: similar to ubiquitin protein ligase E3A (human papilloma virus E6-asso
|
1.0e-36
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: E3 ubiquitin-protein ligase
|
4.755e-09
|
|
C-terminus
|
sp_v3.0_unigene102098
|
SustainPine v3.0
|
615
|
• AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: ATP-dependent RNA helicase, putative
|
3.728e-16
|
|
Putative N-terminus
|
sp_v3.0_unigene102887
|
SustainPine v3.0
|
741
|
• AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa
|
0.0
|
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
• Sma3: DNA repair helicase rad5,16, putative
|
5.21e-07
|
|
Internal
|
sp_v3.0_unigene103079
|
SustainPine v3.0
|
836
|
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB
|
0.0
|
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
sp_v3.0_unigene103599
|
SustainPine v3.0
|
548
|
• AutoFact: [L] COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
|
1.0e-39
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|