Sustainpine_db
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Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal

Term: IPR000449  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene57242 SustainPine v3.0 377
AutoFact: 5-AMP-activated protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SVJ9_RICCO 1.0e-18
FL-Next: Isoform 2 of SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 0.0
Sma3: SNF1-related protein kinase 1.356e-18
N-terminus
sp_v3.0_unigene59574 SustainPine v3.0 275
AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 2.0e-40
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.605e-13
Internal
sp_v3.0_unigene60214 SustainPine v3.0 298
AutoFact: elongation factor Ts family protein [Arabidopsis thaliana] emb|CAB43920.1| putative protein [Arabidopsis thaliana] emb|CAB79664.1| putative protein [Arabidopsis thaliana] gb|AAL10483.1| AT4g29060/F19B15_90 [Arabidopsis thaliana] gb|AEE85580.1| elongation 3.0e-16
FL-Next: sp=Elongation factor Ts, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast. 0.0
Sma3: Elongation factor Ts 2.317e-17
Putative N-terminus
sp_v3.0_unigene61208 SustainPine v3.0 232
AutoFact: Ubiquitin-protein ligase, UPL1 n=2 Tax=Selaginella moellendorffii RepID=D8T159_SELML 5.0e-12
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62181 SustainPine v3.0 214
AutoFact: putative helicase [Oryza sativa Japonica Group] 7.0e-31
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative RNA helicase A 2.414e-11
Internal
sp_v3.0_unigene63019 SustainPine v3.0 235
AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 3.0e-17
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene63508 SustainPine v3.0 180
AutoFact: Elongation factor Ts n=2 Tax=Andropogoneae RepID=C5X4S1_SORBI 2.0e-16
FL-Next: sp=Elongation factor Ts, chloroplastic; Galdieria sulphuraria (Red alga). Plastid; Chloroplast. 0.0
Sma3: Elongation factor Ts 4.608e-14
Internal
sp_v3.0_unigene63915 SustainPine v3.0 199
AutoFact: DUF298 domain containing protein 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DCN1-like protein 2 6.056e-10
C-terminus
sp_v3.0_unigene64526 SustainPine v3.0 201
AutoFact: SNF2 superfamily RAD5 protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S188_PHYPA 2.0e-12
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64632 SustainPine v3.0 276
AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nascent polypeptide associated complex alpha subunit, putative 9.826e-13
C-terminus
sp_v3.0_unigene64795 SustainPine v3.0 142
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene65345 SustainPine v3.0 152
AutoFact: putative DNA repair protein RAD23-3 [Arabidopsis thaliana] sp|Q84L31.2|RD23C_ARATH RecName: Full=Putative DNA repair protein RAD23-3; AltName: Full=RAD23-like protein 3; Short=AtRAD23-3 gb|AAF32461.1| putative RAD23 [Arabidopsis thaliana] gb|AAK62617.1| A 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene67996 SustainPine v3.0 412
AutoFact: Putative DNA repair protein n=1 Tax=Ipomoea trifida RepID=Q6JJ38_IPOTF 2.0e-11
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene68715 SustainPine v3.0 200
AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 3.0e-17
FL-Next: sp=Nascent polypeptide-associated complex subunit alpha-like protein; Pinus taeda (Loblolly pine). 0.0
Sma3: Nascent polypeptide associated complex alpha subunit, putative 1.118e-12
C-terminus
sp_v3.0_unigene68735 SustainPine v3.0 253
AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9STJ2_RICCO 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair helicase rad5,16, putative 2.683e-07
Internal
sp_v3.0_unigene69120 SustainPine v3.0 191
AutoFact: Unassigned protein 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene69877 SustainPine v3.0 377
AutoFact: DNA methyltransferase [Nicotiana tabacum] 3.0e-37
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative DNA cytosine methyltransferase Zmet3 3.982e-08
Internal
sp_v3.0_unigene69995 SustainPine v3.0 397
AutoFact: Probable DNA repair protein RAD23 n=3 Tax=Oryza sativa RepID=RAD23_ORYSJ 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uv excision repair protein rad23, putative 1.37e-07
C-terminus
sp_v3.0_unigene72024 SustainPine v3.0 168
AutoFact: putative Werner helicase-interacting protein [Arabidopsis thaliana] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73970 SustainPine v3.0 294
AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001985AA9 9.00054e-42
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.276e-18
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain