Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal

Term: IPR000449  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene24473 SustainPine v3.0 625
AutoFact: Putative ubiquitin-conjugating enzyme E2 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q3I2_9MYCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene24493 SustainPine v3.0 764
AutoFact: Nascent polypeptide-associated complex subunit alpha n=28 Tax=Euteleostomi RepID=NACA_DANRE 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nascent polypeptide-associated complex alpha subunit-like protein 6.725e-12
Putative Complete
sp_v3.0_unigene25901 SustainPine v3.0 588
AutoFact: RecName: Full=Nascent polypeptide-associated complex subunit alpha-like protein; Short=NAC-alpha-like protein; AltName: Full=Alpha-NAC-like protein gb|AAF27917.1|AF220200_1 nascent polypeptide associated complex alpha chain [Pinus taeda] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nascent polypeptide-associated complex alpha subunit-like protein 6.32e-12
C-terminus
sp_v3.0_unigene27713 SustainPine v3.0 717
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uv excision repair protein rad23, putative 1.217e-11
N-terminus
sp_v3.0_unigene28305 SustainPine v3.0 838
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene28398 SustainPine v3.0 2017
AutoFact: vacuolar protein sorting-associated protein 36 [Arabidopsis thaliana] sp|Q9FF81.1|VPS36_ARATH RecName: Full=Vacuolar protein sorting-associated protein 36; Short=AtVPS36; AltName: Full=ESCRT-II complex subunit VPS36 dbj|BAB11514.1| unnamed protein product 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 36; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative Complete
sp_v3.0_unigene28458 SustainPine v3.0 2193
AutoFact: Elongation factor Ts n=1 Tax=Solanum lycopersicum RepID=Q9SWW0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Ts 1.705e-24
Complete
sp_v3.0_unigene29552 SustainPine v3.0 1194
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5A9I6_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene31947 SustainPine v3.0 465
AutoFact: nascent polypeptide associated complex protein alpha subunit, isoform B [Drosophila melanogaster] ref|NP_599139.1| nascent polypeptide associated complex protein alpha subunit, isoform A [Drosophila melanogaster] ref|NP_725229.1| nascent polypeptide assoc 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nascent polypeptide-associated complex alpha subunit-like protein 1.141e-08
N-terminus
sp_v3.0_unigene34123 SustainPine v3.0 1530
AutoFact: Plant ubiquilin, putative n=1 Tax=Ricinus communis RepID=B9S6T7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquilin-1 5.451e-09
Complete
sp_v3.0_unigene34200 SustainPine v3.0 1017
AutoFact: OTU domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SCB5_RICCO 0.0
FL-Next: tr=OTU domain-containing protein, putative; Ricinus communis (Castor bean). 0.0
Putative C-terminus
sp_v3.0_unigene34487 SustainPine v3.0 1981
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair helicase rad5,16, putative 5.762e-11
Putative Complete
sp_v3.0_unigene34793 SustainPine v3.0 1166
AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 0.0
FL-Next: sp=Nascent polypeptide-associated complex subunit alpha-like protein; Pinus taeda (Loblolly pine). 0.0
Sma3: Alpha-NAC-like protein 0.0
Complete
sp_v3.0_unigene34928 SustainPine v3.0 1127
AutoFact: RAD23-like n=2 Tax=Solanum tuberosum RepID=Q38JH6_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uv excision repair protein rad23, putative 2.64e-11
N-terminus
sp_v3.0_unigene35389 SustainPine v3.0 882
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair protein RAD23 1.078e-13
C-terminus
sp_v3.0_unigene35741 SustainPine v3.0 1573
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKT1_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene37105 SustainPine v3.0 292
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 6.0e-28
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 5.891e-09
Internal
sp_v3.0_unigene37880 SustainPine v3.0 1348
AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene40706 SustainPine v3.0 979
AutoFact: PREDICTED: similar to Os07g0681600 n=1 Tax=Vitis vinifera RepID=UPI00019834DE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA Helicase 5.744e-14
Internal
sp_v3.0_unigene41084 SustainPine v3.0 345
AutoFact: putative DNA repair protein [Ipomoea trifida] dbj|BAF36331.1| hypothetical protein [Ipomoea trifida] 1.0e-32
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase rad5,16, putative 1.7e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain