Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal

Term: IPR000449  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8816 SustainPine v3.0 2320
AutoFact: protein kinase-like protein [Arabidopsis thaliana] emb|CAB80112.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CBL-interacting protein kinase 3 1.708e-09
Complete
sp_v3.0_unigene9549 SustainPine v3.0 1431
AutoFact: UBA-like n=2 Tax=Medicago truncatula RepID=Q2HSZ5_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12986 SustainPine v3.0 2358
AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAY34175.1| At2g12550 [Arabidopsis thaliana] gb|AEC06204.1| ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene13492 SustainPine v3.0 1144
AutoFact: ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) [Xenopus (Silurana) tropicalis] gb|AAH67999.1| ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) [Xenopus (Silurana) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin-protein ligase 1.248e-09
C-terminus
sp_v3.0_unigene13576 SustainPine v3.0 380
AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.47e-11
Internal
sp_v3.0_unigene13830 SustainPine v3.0 911
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 8.772e-06
Internal
sp_v3.0_unigene14006 SustainPine v3.0 959
AutoFact: UBA-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UBA/TS-N domain 1.696e-09
C-terminus
sp_v3.0_unigene14952 SustainPine v3.0 363
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 4.0e-27
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene15164 SustainPine v3.0 988
AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene15866 SustainPine v3.0 683
AutoFact: ATP-dependent RNA helicase, putative 4.0e-29
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.366e-13
Putative N-terminus
sp_v3.0_unigene16711 SustainPine v3.0 851
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 2.0e-18
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene17255 SustainPine v3.0 1644
AutoFact: Ubiquitin-associated (UBA) protein [Arabidopsis thaliana] emb|CAC00737.1| putative protein [Arabidopsis thaliana] gb|AAM63026.1| unknown [Arabidopsis thaliana] gb|AAO63279.1| At3g56740 [Arabidopsis thaliana] dbj|BAE99920.1| hypothetical protein [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UBA/TS-N domain 1.463e-09
Complete
sp_v3.0_unigene17424 SustainPine v3.0 1907
AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAF40452.1|AC004809_10 ESTs gb|N65605, gb|N38087, gb|T20485, gb|T13726, gb|N38339, gb|F15440 and gb|N97201 come from this gene [Arabidopsis thaliana] gb|AAL32687.1| Unknow 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Ubiquitin-associated uba/ubx domain-containing protein, putative 6.042e-09
Complete
sp_v3.0_unigene17580 SustainPine v3.0 1384
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AEE83354.1| zinc ion binding protein [Arabidopsis thaliana] 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene17951 SustainPine v3.0 1191
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKT1_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18206 SustainPine v3.0 1875
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Sma3: RAD23 0.0
Complete
sp_v3.0_unigene20419 SustainPine v3.0 721
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 9.0e-37
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 5.596e-09
Internal
sp_v3.0_unigene21897 SustainPine v3.0 523
AutoFact: Nascent polypeptide-associated complex alpha polypeptide (Fragment) n=1 Tax=Salmo salar RepID=B5RI66_SALSA 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nascent polypeptide-associated complex alpha subunit-like protein 4.601e-12
C-terminus
sp_v3.0_unigene23074 SustainPine v3.0 2720
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23445 SustainPine v3.0 522
AutoFact: Ubiquitin-conjugating enzyme E2-16 kDa n=48 Tax=Fungi/Metazoa group RepID=UBC1_MAGO7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain