Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene105001 SustainPine v3.0 474
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene105259 SustainPine v3.0 352
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative anthocyanin transcriptional regulator 7.497e-32
Putative N-terminus
sp_v3.0_unigene105984 SustainPine v3.0 371
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 2.05e-07
Internal
sp_v3.0_unigene106070 SustainPine v3.0 475
AutoFact: Transcription factor SPATULA n=2 Tax=Arabidopsis RepID=SPT_ARATH 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helix-loop-helix DNA-binding domain containing protein, expressed 5.908e-06
N-terminus
sp_v3.0_unigene106933 SustainPine v3.0 382
AutoFact: bHLH transcription factor PTF1-like [Oryza sativa Japonica Group] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.252e-19
N-terminus
sp_v3.0_unigene108203 SustainPine v3.0 547
AutoFact: putative transcription factor BHLH6 [Arabidopsis thaliana] 2.0e-25
FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
N-terminus
sp_v3.0_unigene108948 SustainPine v3.0 485
AutoFact: basic helix-loop-helix (bHLH) family protein 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene111749 SustainPine v3.0 362
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative anthocyanin transcriptional regulator 5.037e-21
Internal
sp_v3.0_unigene114421 SustainPine v3.0 140
AutoFact: Unassigned protein 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene116229 SustainPine v3.0 551
AutoFact: Unassigned protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene116405 SustainPine v3.0 373
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene116984 SustainPine v3.0 220
AutoFact: MYC transcription factor [Solanum tuberosum] 2.0e-13
FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
Sma3: JAMYC 5.361e-06
Internal
sp_v3.0_unigene117070 SustainPine v3.0 167
AutoFact: Unassigned protein 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene118284 SustainPine v3.0 178
AutoFact: Unassigned protein 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene119107 SustainPine v3.0 203
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEI3_RICCO 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 3.946e-08
Internal
sp_v3.0_unigene123949 SustainPine v3.0 209
AutoFact: Basic helix-loop-helix-like n=3 Tax=Oryza sativa RepID=Q6ETQ5_ORYSJ 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 4.409e-15
Putative C-terminus
sp_v3.0_unigene124833 SustainPine v3.0 193
AutoFact: ICE-like protein n=1 Tax=Corylus heterophylla RepID=F2YGR3_9ROSI 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative anthocyanin transcriptional regulator 1.573e-19
N-terminus
sp_v3.0_unigene125396 SustainPine v3.0 355
AutoFact: bHLH transcription factor-like protein [Oryza sativa Japonica Group] dbj|BAD30671.1| bHLH transcription factor-like protein [Oryza sativa Japonica Group] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor, putative 1.263e-12
Putative C-terminus
sp_v3.0_unigene128705 SustainPine v3.0 541
AutoFact: bHLH transcription factor [Brassica napus] 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene129197 SustainPine v3.0 502
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 1.538e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain