Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene33903 SustainPine v3.0 436
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene33919 SustainPine v3.0 899
AutoFact: Helix-loop-helix DNA-binding n=1 Tax=Medicago truncatula RepID=Q2HTT3_MEDTR 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene34237 SustainPine v3.0 2013
AutoFact: basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group] dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.276e-20
Putative Complete
sp_v3.0_unigene35478 SustainPine v3.0 1025
AutoFact: cwf21 domain containing protein 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene36292 SustainPine v3.0 1257
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene37261 SustainPine v3.0 800
AutoFact: transcription factor bHLH112 [Arabidopsis thaliana] sp|Q94JL3.1|BH112_ARATH RecName: Full=Transcription factor bHLH112; AltName: Full=Basic helix-loop-helix protein 112; Short=AtbHLH112; Short=bHLH 112; AltName: Full=Transcription factor EN 64; AltName: F 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor, putative 1.352e-09
C-terminus
sp_v3.0_unigene38062 SustainPine v3.0 381
AutoFact: Unassigned protein 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene40701 SustainPine v3.0 1858
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 4.054e-11
Putative Complete
sp_v3.0_unigene43000 SustainPine v3.0 938
AutoFact: MYC transcription factor [Solanum tuberosum] 0.0
FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
Sma3: MYC transcription factor 1.042e-08
N-terminus
sp_v3.0_unigene46135 SustainPine v3.0 420
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RDS0_RICCO 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative anthocyanin transcriptional regulator 1.151e-31
Internal
sp_v3.0_unigene46926 SustainPine v3.0 767
AutoFact: Unassigned protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene47817 SustainPine v3.0 403
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inducer of CBF expression 1 protein 4.061e-08
N-terminus
sp_v3.0_unigene47915 SustainPine v3.0 1071
AutoFact: FAD-linked oxidoreductase 1 n=1 Tax=Glycine max RepID=Q2PMD5_SOYBN 0.0
FL-Next: sp=Reticuline oxidase; Eschscholzia californica (California poppy). 0.0
Sma3: Reticuline oxidase, putative 9.251e-31
Putative C-terminus
sp_v3.0_unigene48132 SustainPine v3.0 597
AutoFact: Transcription factor SCREAM2 n=2 Tax=Arabidopsis RepID=SCRM2_ARATH 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inducer of CBF expression 1 5.633e-12
C-terminus
sp_v3.0_unigene49106 SustainPine v3.0 1821
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 4.054e-11
Putative Complete
sp_v3.0_unigene49893 SustainPine v3.0 1428
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene51091 SustainPine v3.0 131
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 3.0e-07
FL-Next: sp=Transcription factor bHLH66; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BHLH transcription factor 1.78e-20
Internal
sp_v3.0_unigene51901 SustainPine v3.0 353
AutoFact: inducer of CBF expression 1 protein [Capsella bursa-pastoris] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inducer of CBF expression 1 3.873e-12
Internal
sp_v3.0_unigene52214 SustainPine v3.0 403
AutoFact: transcription factor BPE [Arabidopsis thaliana] sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH 31; AltName: Full=Protein BIG PETAL; AltName: Full=Transcription fact 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene52330 SustainPine v3.0 399
AutoFact: bHLH transcription factor-like protein [Oryza sativa Japonica Group] dbj|BAD30671.1| bHLH transcription factor-like protein [Oryza sativa Japonica Group] 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor, putative 1.116e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain