Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene405 SustainPine v3.0 641
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 1.0e-28
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 1.5e-17
N-terminus
sp_v3.0_unigene450 SustainPine v3.0 3790
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LIGULELESS1 protein, putative 6.394e-18
Putative C-terminus
sp_v3.0_unigene640 SustainPine v3.0 1987
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-tubulin 2.28e-13
Complete
sp_v3.0_unigene865 SustainPine v3.0 2578
AutoFact: MORN domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein Sb01g028730; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: ICE-like protease p20 domain containing protein, expressed 4.92e-12
Complete
sp_v3.0_unigene1094 SustainPine v3.0 3005
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 6.356e-15
Putative Complete
sp_v3.0_unigene1702 SustainPine v3.0 2083
AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gamma tubulin 0.0
Complete
sp_v3.0_unigene1882 SustainPine v3.0 2560
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 2.322e-17
C-terminus
sp_v3.0_unigene2541 SustainPine v3.0 1914
AutoFact: Nitrate and chloride transporter n=1 Tax=Glycine max RepID=Q535K6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nodulin family protein, putative, expressed 5.351e-17
Putative Complete
sp_v3.0_unigene3177 SustainPine v3.0 1741
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.555e-16
Putative Complete
sp_v3.0_unigene3259 SustainPine v3.0 1762
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.094e-39
C-terminus
sp_v3.0_unigene3502 SustainPine v3.0 2477
AutoFact: putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 4.206e-17
Complete
sp_v3.0_unigene3780 SustainPine v3.0 2994
AutoFact: homeodomain protein HOX3 [Gossypium hirsutum] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 7.562e-18
Complete
sp_v3.0_unigene3976 SustainPine v3.0 2520
AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastid division protein FtsZ 3.514e-27
Complete
sp_v3.0_unigene4049 SustainPine v3.0 3369
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCZ5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.094e-39
Complete
sp_v3.0_unigene4262 SustainPine v3.0 1091
AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.393e-10
C-terminus
sp_v3.0_unigene4746 SustainPine v3.0 517
AutoFact: RecName: Full=Squamosa promoter-binding-like protein 15 sp|A2YX04.1|SPL15_ORYSI RecName: Full=Squamosa promoter-binding-like protein 15 dbj|BAD10073.1| putative SPL1-Related2 protein [Oryza sativa Japonica Group] gb|EAZ07615.1| hypothetical protein OsI_29 8.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Squamosa promoter-binding protein, putative 4.935e-23
Putative C-terminus
sp_v3.0_unigene5163 SustainPine v3.0 432
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 8.0e-17
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 4.063e-13
Putative N-terminus
sp_v3.0_unigene5461 SustainPine v3.0 2085
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 8.929e-18
C-terminus
sp_v3.0_unigene5932 SustainPine v3.0 1823
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Squamosa promoter-binding protein, putative 6.291e-23
Complete
sp_v3.0_unigene6914 SustainPine v3.0 1039
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 0.0
FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
Sma3: F-box family protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain