Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127447 SustainPine v3.0 1317
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 7.18e-31
Putative Complete
sp_v3.0_unigene127530 SustainPine v3.0 1333
AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.282e-14
Putative Complete
sp_v3.0_unigene127837 SustainPine v3.0 1369
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 2.167e-13
Putative Complete
sp_v3.0_unigene129238 SustainPine v3.0 419
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 6.35e-10
C-terminus
sp_v3.0_unigene129700 SustainPine v3.0 172
unknown
sp_v3.0_unigene130136 SustainPine v3.0 422
AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9GK99_POPTR 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F-box family protein 1.224e-38
N-terminus
sp_v3.0_unigene130949 SustainPine v3.0 250
AutoFact: RecName: Full=Squamosa promoter-binding-like protein 15 sp|A2YX04.1|SPL15_ORYSI RecName: Full=Squamosa promoter-binding-like protein 15 dbj|BAD10073.1| putative SPL1-Related2 protein [Oryza sativa Japonica Group] gb|EAZ07615.1| hypothetical protein OsI_29 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Squamosa promoter-binding protein, putative 1.511e-22
Internal
sp_v3.0_unigene131727 SustainPine v3.0 147
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 1.534e-27
Internal
sp_v3.0_unigene132897 SustainPine v3.0 248
AutoFact: Beta-tubulin (Fragment) n=1 Tax=Spinacia oleracea RepID=A3FMG7_SPIOL 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene133173 SustainPine v3.0 679
AutoFact: Tubulin alpha subunit n=11 Tax=Eukaryota RepID=B1NHW5_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin alpha-2 chain 1.525e-09
Putative Complete
sp_v3.0_unigene137293 SustainPine v3.0 222
AutoFact: Beta-tubulin (Fragment) n=2 Tax=core eudicotyledons RepID=B3GQU8_CITMA 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin 1.777e-08
Internal
sp_v3.0_unigene137386 SustainPine v3.0 210
AutoFact: Tubulin alpha-2 chain n=20 Tax=Magnoliophyta RepID=TBA2_ORYSJ 2.0e-15
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Sma3: Alpha tubulin 5.684e-09
N-terminus
sp_v3.0_unigene137616 SustainPine v3.0 259
AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin 1.822e-06
Internal
sp_v3.0_unigene138348 SustainPine v3.0 314
AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 8.0e-38
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 1.33e-15
C-terminus
sp_v3.0_unigene138412 SustainPine v3.0 234
AutoFact: Unassigned protein
unknown
sp_v3.0_unigene138421 SustainPine v3.0 266
AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-tubulin 1.85e-15
Putative N-terminus
sp_v3.0_unigene140034 SustainPine v3.0 352
AutoFact: Homeobox-leucine zipper protein ROC7 n=5 Tax=Oryza RepID=ROC7_ORYSJ 4.0e-23
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: OCL5 protein 1.699e-08
Internal
sp_v3.0_unigene140374 SustainPine v3.0 1179
AutoFact: alpha-tubulin [Eucalyptus grandis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 2.223e-14
Putative Complete
sp_v3.0_unigene141244 SustainPine v3.0 411
AutoFact: Tubulin beta-3 chain (Fragment) n=1 Tax=Anemia phyllitidis RepID=TBB3_ANEPH 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin like protein 2.06e-08
Internal
sp_v3.0_unigene141356 SustainPine v3.0 670
AutoFact: PREDICTED: tubulin beta-8 chain-like n=2 Tax=Macaca mulatta RepID=UPI0001D55545 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin 3.651e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain