Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene99174 SustainPine v3.0 1058
• AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 5.596e-12
C-terminus
sp_v3.0_unigene99572 SustainPine v3.0 531
• AutoFact: kinesin family member 4/7/21/27 [Arabidopsis thaliana] gb|AED97398.1| kinesin family member 4/7/21/27 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin-like protein 1.278e-20
Internal
sp_v3.0_unigene99594 SustainPine v3.0 429
• AutoFact: Alpha-tubulin n=1 Tax=Sterkiella histriomuscorum RepID=Q49I46_OXYTR 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.834e-28
N-terminus
sp_v3.0_unigene100653 SustainPine v3.0 221
• AutoFact: FtsZ-like protein [Nicotiana tabacum] 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast FtsZ-like protein 3.687e-08
Internal
sp_v3.0_unigene101152 SustainPine v3.0 847
• AutoFact: SBP-domain protein 6 [Physcomitrella patens] 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 1.414e-22
Putative Complete
sp_v3.0_unigene101446 SustainPine v3.0 602
• AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 4.031e-17
C-terminus
sp_v3.0_unigene102643 SustainPine v3.0 966
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 1.511e-22
N-terminus
sp_v3.0_unigene102860 SustainPine v3.0 715
• AutoFact: zinc finger protein MAGPIE [Arabidopsis thaliana] sp|Q9ZWA6.1|MGP_ARATH RecName: Full=Zinc finger protein MAGPIE gb|AAD10684.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAP12858.1| At1g03840 [Arabidopsis thaliana] dbj|BAE99815.1| putative DN 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 3.788e-32
Putative N-terminus
sp_v3.0_unigene103707 SustainPine v3.0 447
• Sma3: FtsZ1 1.929e-10
coding
sp_v3.0_unigene105888 SustainPine v3.0 146
• AutoFact: Nodulin family protein, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q10F41_ORYSJ 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 1.738e-17
C-terminus
sp_v3.0_unigene107497 SustainPine v3.0 357
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 2.80199e-40
Internal
sp_v3.0_unigene108446 SustainPine v3.0 532
• AutoFact: Tubulin alpha chain n=1 Tax=Euplotes vannus RepID=TBA_EUPVA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 5.682e-18
Internal
sp_v3.0_unigene108514 SustainPine v3.0 427
• AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 2.923e-18
Internal
sp_v3.0_unigene110548 SustainPine v3.0 422
• AutoFact: Alpha-tubulin, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LMN4_9ALVE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 2.879e-12
C-terminus
sp_v3.0_unigene113409 SustainPine v3.0 388
• AutoFact: Homeodomain protein HOX3 n=1 Tax=Gossypium hirsutum RepID=Q66Q67_GOSHI 6.02558e-44
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Homeobox protein, putative 3.336e-17
N-terminus
sp_v3.0_unigene117098 SustainPine v3.0 438
• AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 5.987e-17
Putative C-terminus
sp_v3.0_unigene122026 SustainPine v3.0 371
• AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAC98454.1| nodulin-like protein [Arabidopsis thaliana] gb|AAL14413.1| At2g28120/F24D13.9 [Arabidopsis thaliana] gb|AAL32615.1| nodulin-like protein [Arabidopsis thaliana] gb|AAM13326.1| nodulin-like pro 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 1.107e-16
Internal
sp_v3.0_unigene122150 SustainPine v3.0 545
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nodulin family protein, putative, expressed 6.971e-17
Internal
sp_v3.0_unigene125045 SustainPine v3.0 241
• AutoFact: Tubulin alpha-1 chain n=5 Tax=Coelomata RepID=F4WDI4_9HYME 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 8.717e-26
Putative C-terminus
sp_v3.0_unigene125700 SustainPine v3.0 379
• AutoFact: phototropin 2 [Arabidopsis thaliana] gb|AED97003.1| phototropin 2 [Arabidopsis thaliana] 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 5.394e-32
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain