Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tubulin

Term: IPR000217  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene145944 SustainPine v3.0 513
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta-1 chain 5.256e-09
C-terminus
sp_v3.0_unigene145999 SustainPine v3.0 956
• AutoFact: Beta tubulin (Fragment) n=1 Tax=Rhodomonas salina RepID=C0SKA0_RHDSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 6.63e-14
Putative Complete
sp_v3.0_unigene146028 SustainPine v3.0 969
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha tubulin 1.2e-26
Putative C-terminus
sp_v3.0_unigene146083 SustainPine v3.0 781
• AutoFact: alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92353.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92354.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92355.1| alpha tubulin 1 [Pseudotsuga menziesii var. m 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.235e-23
C-terminus
sp_v3.0_unigene146086 SustainPine v3.0 982
• AutoFact: Tubulin alpha subunit n=11 Tax=Eukaryota RepID=B1NHW5_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 3.286e-14
Misassembled
sp_v3.0_unigene146143 SustainPine v3.0 728
• AutoFact: PREDICTED: similar to Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin isotype M-alpha-3/7) n=1 Tax=Pan troglodytes RepID=UPI0000E23559 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.555e-10
Putative Complete
sp_v3.0_unigene146176 SustainPine v3.0 318
• AutoFact: Tubulin alpha 3 chain (Fragment) n=5 Tax=Magnoliophyta RepID=A6MZF8_ORYSI 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.449e-18
Internal
sp_v3.0_unigene146192 SustainPine v3.0 800
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 5.21e-23
N-terminus
sp_v3.0_unigene146199 SustainPine v3.0 519
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha-tubulin 1.113e-21
Internal
sp_v3.0_unigene146249 SustainPine v3.0 736
• AutoFact: PREDICTED: similar to Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin isotype M-alpha-3/7) n=1 Tax=Pan troglodytes RepID=UPI0000E23559 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha-tubulin 7.347e-31
Putative N-terminus
sp_v3.0_unigene146265 SustainPine v3.0 783
• AutoFact: Alpha-tubulin-like protein n=1 Tax=Solanum tuberosum RepID=Q3HRW7_SOLTU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.123e-10
N-terminus
sp_v3.0_unigene146331 SustainPine v3.0 911
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.391e-17
Putative Complete
sp_v3.0_unigene146428 SustainPine v3.0 1199
• AutoFact: alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92353.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92354.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92355.1| alpha tubulin 1 [Pseudotsuga menziesii var. m 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.506e-31
Putative Complete
sp_v3.0_unigene146463 SustainPine v3.0 386
• AutoFact: PREDICTED: similar to tubulin, alpha 1 n=1 Tax=Canis lupus familiaris RepID=UPI00005A03AE 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.109e-28
Internal
sp_v3.0_unigene146506 SustainPine v3.0 607
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.736e-24
Internal
sp_v3.0_unigene146509 SustainPine v3.0 462
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin alpha-2 chain 1.544e-09
Putative Complete
sp_v3.0_unigene146538 SustainPine v3.0 652
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-1C chain-like n=1 Tax=Macaca mulatta RepID=UPI0001D53D82 8.96831e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 6.249e-24
Putative N-terminus
sp_v3.0_unigene146542 SustainPine v3.0 534
• AutoFact: alpha-tubulin 3 [Populus tremuloides] 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.621e-28
N-terminus
sp_v3.0_unigene146568 SustainPine v3.0 488
• AutoFact: Alpha-tubulin (Fragment) n=5 Tax=core eudicotyledons RepID=Q9SQ74_GOSHI 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 3.033e-16
Putative Complete
sp_v3.0_unigene146602 SustainPine v3.0 551
• AutoFact: Tubulin alpha 3 chain (Fragment) n=5 Tax=Magnoliophyta RepID=A6MZF8_ORYSI 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.086e-13
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain