Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tubulin

Term: IPR000217  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene44252 SustainPine v3.0 419
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin alpha-2 chain 1.459e-09
C-terminus
sp_v3.0_unigene45100 SustainPine v3.0 465
AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 4.858e-24
Internal
sp_v3.0_unigene45504 SustainPine v3.0 262
AutoFact: PREDICTED: tubulin beta-6 chain isoform 3 n=1 Tax=Pan troglodytes RepID=UPI00020E4624 1.0e-05
FL-Next: tr=Beta-tubulin 2; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Tubulin beta chain 4.071e-15
Complete
sp_v3.0_unigene46180 SustainPine v3.0 945
AutoFact: chromatin remodeling 5 [Arabidopsis thaliana] gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene47759 SustainPine v3.0 1072
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene50931 SustainPine v3.0 1450
AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin beta chain, putative 0.0
N-terminus
sp_v3.0_unigene51462 SustainPine v3.0 331
AutoFact: Alpha-tubulin (Fragment) n=5 Tax=core eudicotyledons RepID=Q9SQ74_GOSHI 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene51791 SustainPine v3.0 461
AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin beta-7 chain 1.145e-07
Internal
sp_v3.0_unigene52907 SustainPine v3.0 350
AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.289e-10
Putative C-terminus
sp_v3.0_unigene55342 SustainPine v3.0 367
AutoFact: PREDICTED: tubulin beta chain-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEC983 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin 2.23e-09
Internal
sp_v3.0_unigene55547 SustainPine v3.0 189
AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin 9.885e-11
Internal
sp_v3.0_unigene55606 SustainPine v3.0 408
AutoFact: Tubulin beta chain n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JTY1_UNCRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin 9.318e-11
Internal
sp_v3.0_unigene55857 SustainPine v3.0 450
AutoFact: TBB1_VOLCA Tubulin beta chain (ISS) n=2 Tax=Ostreococcus RepID=Q01GL4_OSTTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin 1.714e-08
Internal
sp_v3.0_unigene56507 SustainPine v3.0 313
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene57438 SustainPine v3.0 471
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.135e-28
N-terminus
sp_v3.0_unigene57688 SustainPine v3.0 186
AutoFact: Beta-tubulin (Fragment) n=2 Tax=core eudicotyledons RepID=B3GQU8_CITMA 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin beta chain 7.927e-10
Internal
sp_v3.0_unigene58365 SustainPine v3.0 409
AutoFact: Alpha tubulin (Fragment) n=9 Tax=Eukaryota RepID=Q5UMY4_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 9.459e-29
Putative Complete
sp_v3.0_unigene58533 SustainPine v3.0 162
AutoFact: beta-tubulin [Eucalyptus grandis] 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin beta-7 chain 1.121e-07
Internal
sp_v3.0_unigene58741 SustainPine v3.0 165
AutoFact: Tubulin beta 8 chain (Fragment) n=1 Tax=Oryza sativa Indica Group RepID=A6MZI9_ORYSI 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59358 SustainPine v3.0 263
AutoFact: tubulin alpha-3 chain [Oryza sativa Indica Group] 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 2.51e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain