Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tubulin

Term: IPR000217  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18421 SustainPine v3.0 480
AutoFact: Beta tubulin (Fragment) n=4 Tax=Tetrapoda RepID=Q60456_CRIGR 1.0e-06
FL-Next: tr=Beta-tubulin 2; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Tubulin beta chain 7.745e-12
Complete
sp_v3.0_unigene20776 SustainPine v3.0 732
AutoFact: putative protein kinase [Oryza sativa Japonica Group] 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 2.157e-10
Internal
sp_v3.0_unigene21410 SustainPine v3.0 1637
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin, beta chain 0.0
Complete
sp_v3.0_unigene22117 SustainPine v3.0 1794
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene28779 SustainPine v3.0 564
AutoFact: Os04g0654600 protein n=4 Tax=Oryza sativa RepID=Q0J9G2_ORYSJ 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene29270 SustainPine v3.0 579
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.289e-10
C-terminus
sp_v3.0_unigene29372 SustainPine v3.0 563
AutoFact: Receptor-like cytosolic serine/threonine-protein kinase RBK2 n=2 Tax=Arabidopsis RepID=RBK2_ARATH 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 6.315e-07
Complete
sp_v3.0_unigene32266 SustainPine v3.0 1077
AutoFact: RecName: Full=Tubulin alpha-1 chain gb|AAA79910.1| alpha-tubulin [Pisum sativum] 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Sma3: Tubulin alpha-2 chain 1.35e-09
C-terminus
sp_v3.0_unigene34073 SustainPine v3.0 1881
AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr2 scaffold_105, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene34100 SustainPine v3.0 1392
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 3.334e-26
N-terminus
sp_v3.0_unigene34195 SustainPine v3.0 1153
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.784e-17
N-terminus
sp_v3.0_unigene34339 SustainPine v3.0 920
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TBB1_VOLCA Tubulin beta chain (ISS) 3.313e-08
Internal
sp_v3.0_unigene35513 SustainPine v3.0 1076
AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin beta chain 4.899e-12
C-terminus
sp_v3.0_unigene36386 SustainPine v3.0 694
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TBB1_VOLCA Tubulin beta chain (ISS) 2.689e-08
Internal
sp_v3.0_unigene36423 SustainPine v3.0 436
AutoFact: Beta-tubulin (Fragment) n=6 Tax=Pseudotsuga RepID=C6FB34_PSEMZ 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-tubulin 6.143e-12
C-terminus
sp_v3.0_unigene36455 SustainPine v3.0 1172
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-tubulin 2.177e-15
N-terminus
sp_v3.0_unigene37897 SustainPine v3.0 1309
AutoFact: Alpha-tubulin n=3 Tax=Foraminifera RepID=Q26233_RETFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 7.507e-29
N-terminus
sp_v3.0_unigene38048 SustainPine v3.0 363
AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 5.0e-14
FL-Next: sp=Tubulin gamma chain; Anemia phyllitidis (Fern) (Osmunda phyllitidis). 0.0
Sma3: Gamma-tubulin 9.483e-16
C-terminus
sp_v3.0_unigene38891 SustainPine v3.0 1835
AutoFact: putative receptor protein kinase PERK1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 1.01e-16
Complete
sp_v3.0_unigene40508 SustainPine v3.0 1860
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain