Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pseudouridine synthase/archaeosine transglycosylase

Term: IPR002478  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1664 SustainPine v3.0 1254
AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1782 SustainPine v3.0 1999
AutoFact: S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] gb|AEE33079.1| S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene3673 SustainPine v3.0 1889
AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Centromere/microtubule binding protein cbf5, putative 4.506e-08
Complete
sp_v3.0_unigene16322 SustainPine v3.0 2145
AutoFact: eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] dbj|BAE99137.1| hypothetical protein [Arabidopsis thaliana] gb|AEE35192.1| eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
C-terminus
sp_v3.0_unigene19052 SustainPine v3.0 1662
AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene19121 SustainPine v3.0 1807
AutoFact: Plant origin recognition complex subunit, putative n=1 Tax=Ricinus communis RepID=B9SP26_RICCO 0.0
FL-Next: sp=Origin recognition complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 40S ribosomal protein SA 3.763e-24
Complete
sp_v3.0_unigene23239 SustainPine v3.0 930
AutoFact: eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] dbj|BAE99137.1| hypothetical protein [Arabidopsis thaliana] gb|AEE35192.1| eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] 2.0e-39
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene25796 SustainPine v3.0 432
AutoFact: Ribosomal protein L18 n=1 Tax=Ostreococcus tauri RepID=Q011F6_OSTTA 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
Putative Complete
sp_v3.0_unigene26446 SustainPine v3.0 437
AutoFact: Ribosomal protein L18 n=1 Tax=Ostreococcus tauri RepID=Q011F6_OSTTA 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene27586 SustainPine v3.0 662
AutoFact: Ribosomal protein L18 n=1 Tax=Monosiga brevicollis RepID=A9UXJ0_MONBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene28377 SustainPine v3.0 628
AutoFact: Ribosomal protein L18 n=1 Tax=Lineus viridis RepID=B0Z9M1_9BILA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene30376 SustainPine v3.0 1143
AutoFact: RNA binding protein [Arabidopsis thaliana] gb|AAS76220.1| At4g15770 [Arabidopsis thaliana] gb|AEE83650.1| RNA binding protein [Arabidopsis thaliana] 0.0
FL-Next: sp=60S ribosome subunit biogenesis protein NIP7 homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr5 scaffold_2, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene30821 SustainPine v3.0 704
AutoFact: Ribosomal protein L18 n=1 Tax=Lineus viridis RepID=B0Z9M1_9BILA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene31401 SustainPine v3.0 591
AutoFact: Ribosomal protein L18 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CDS4_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 1.349e-30
Putative Complete
sp_v3.0_unigene35166 SustainPine v3.0 479
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRQ3_RICCO 3.0e-06
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene38907 SustainPine v3.0 1113
AutoFact: Nol1_Nop2_Fmu domain containing protein 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene48566 SustainPine v3.0 601
AutoFact: PUA domain containing protein 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene54356 SustainPine v3.0 438
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene62218 SustainPine v3.0 255
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene63516 SustainPine v3.0 221
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain