Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pseudouridine synthase/archaeosine transglycosylase

Term: IPR002478  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene152961 SustainPine v3.0 467
• AutoFact: Ribosomal protein L18 n=4 Tax=Physcomitrella patens subsp. patens RepID=A9RCW9_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative N-terminus
sp_v3.0_unigene153075 SustainPine v3.0 281
• AutoFact: PREDICTED: similar to ribosomal protein L18e [Nasonia vitripennis] 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 2.538e-38
N-terminus
sp_v3.0_unigene153323 SustainPine v3.0 415
• AutoFact: Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|R Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene153561 SustainPine v3.0 458
• AutoFact: Ribosomal protein L18 n=1 Tax=Aspergillus oryzae RIB40 RepID=Q2TZ87_ASPOR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.349e-30
N-terminus
sp_v3.0_unigene153785 SustainPine v3.0 436
• AutoFact: 60S ribosome subunit biogenesis protein NIP7 homolog n=2 Tax=Rana catesbeiana RepID=C1C4D1_RANCA 1.99993e-41
• FL-Next: sp=60S ribosome subunit biogenesis protein NIP7 homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene153824 SustainPine v3.0 385
• AutoFact: Ribosomal protein L18 n=4 Tax=Physcomitrella patens subsp. patens RepID=A9RCW9_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative Complete
sp_v3.0_unigene153859 SustainPine v3.0 329
• AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene153993 SustainPine v3.0 178
• AutoFact: Ribosomal protein L18 n=1 Tax=Monosiga brevicollis RepID=A9UXJ0_MONBE 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 2.171e-35
N-terminus
sp_v3.0_unigene154054 SustainPine v3.0 411
• AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Bos taurus] gb|AAI34582.1| DKC1 protein [Bos taurus] gb|DAA13229.1| dyskerin [Bos taurus] 8.00141e-43
• FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Centromere/microtubule binding protein cbf5, putative 3.187e-08
Internal
sp_v3.0_unigene154267 SustainPine v3.0 365
• AutoFact: Ribosomal protein L18 n=3 Tax=Blastocystis hominis RepID=D8M2N8_BLAHO 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.71e-14
C-terminus
sp_v3.0_unigene154404 SustainPine v3.0 397
• AutoFact: Ribosomal protein L18 n=4 Tax=Physcomitrella patens subsp. patens RepID=A9RCW9_PHYPA 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
C-terminus
sp_v3.0_unigene154710 SustainPine v3.0 250
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TEP4_PHYPA 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene154864 SustainPine v3.0 549
• AutoFact: 60S ribosome subunit biogenesis protein NIP7 homolog [Xenopus (Silurana) tropicalis] sp|A4QND5.1|NIP7_XENTR RecName: Full=60S ribosome subunit biogenesis protein NIP7 homolog gb|AAI35469.1| LOC100125143 protein [Xenopus (Silurana) tropicalis] 0.0
• FL-Next: sp=60S ribosome subunit biogenesis protein NIP7 homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene155140 SustainPine v3.0 428
• AutoFact: Ribosomal protein L18 n=1 Tax=Suberites domuncula RepID=Q4KTG8_SUBDO 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative N-terminus
sp_v3.0_unigene155283 SustainPine v3.0 223
• AutoFact: Ribosomal protein L18 n=1 Tax=Hister sp. APV-2005 RepID=Q4GXG8_9COLE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.09e-35
N-terminus
sp_v3.0_unigene156672 SustainPine v3.0 473
• AutoFact: Ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus RepID=D7FML2_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative N-terminus
sp_v3.0_unigene156750 SustainPine v3.0 435
• AutoFact: Ribosomal protein L18 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KP82_PUCGT 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 2.266e-38
Putative N-terminus
sp_v3.0_unigene156993 SustainPine v3.0 405
• AutoFact: 60S ribosomal protein L18, putative n=1 Tax=Ricinus communis RepID=B9RFD6_RICCO 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 4.866e-31
C-terminus
sp_v3.0_unigene157680 SustainPine v3.0 333
• AutoFact: Eukaryotic ribosomal protein L18 containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB6E7 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 3.48363e-42
Internal
sp_v3.0_unigene157773 SustainPine v3.0 455
• AutoFact: Ribosomal protein L18 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CDS4_9EUKA 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.349e-30
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain