Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pseudouridine synthase/archaeosine transglycosylase

Term: IPR002478  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene72258 SustainPine v3.0 209
• AutoFact: centromere/microtubule binding protein cbf5 [Cryptococcus neoformans var. neoformans JEC21] ref|XP_775935.1| hypothetical protein CNBD3420 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL21288.1| hypothetical protein CNBD3420 [Cryptococcus neoform 4.0e-09
• FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene76818 SustainPine v3.0 234
• AutoFact: Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|R Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Internal
sp_v3.0_unigene78851 SustainPine v3.0 234
• AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene94047 SustainPine v3.0 350
• AutoFact: NOP2/Sun domain family, member 6 [Xenopus (Silurana) tropicalis] gb|AAH81330.1| nsun6 protein [Xenopus (Silurana) tropicalis] 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene105937 SustainPine v3.0 431
• AutoFact: Unassigned protein
• FL-Next: tr=F12K11.11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene113822 SustainPine v3.0 495
• AutoFact: NOL1/NOP2/Sun family protein [Dictyostelium discoideum AX4] gb|EAL62137.1| NOL1/NOP2/Sun family protein [Dictyostelium discoideum AX4] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene119699 SustainPine v3.0 310
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Putative N-terminus
sp_v3.0_unigene127245 SustainPine v3.0 740
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.349e-30
Putative C-terminus
sp_v3.0_unigene128035 SustainPine v3.0 853
• AutoFact: 60S ribosomal protein L18-2 [Arabidopsis thaliana] sp|P42791.2|RL182_ARATH RecName: Full=60S ribosomal protein L18-2 gb|AAF26138.1|AC011620_14 putative 60S ribosomal protein L18 [Arabidopsis thaliana] gb|AAK59824.1| AT3g05590/F18C1_14 [Arabidopsis thalian 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.349e-30
Complete
sp_v3.0_unigene141446 SustainPine v3.0 304
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 8.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 4.866e-31
C-terminus
sp_v3.0_unigene142737 SustainPine v3.0 619
• AutoFact: Ribosomal protein L18 n=1 Tax=Suberites domuncula RepID=Q4KTG8_SUBDO 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.234e-23
Putative Complete
sp_v3.0_unigene150868 SustainPine v3.0 416
• AutoFact: Ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus RepID=D7FML2_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
C-terminus
sp_v3.0_unigene150974 SustainPine v3.0 293
• AutoFact: Ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus RepID=D7FML2_ECTSI 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
N-terminus
sp_v3.0_unigene151224 SustainPine v3.0 428
• AutoFact: Ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus RepID=D7FML2_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene151748 SustainPine v3.0 266
• AutoFact: Ribosomal protein L18 n=3 Tax=Blastocystis hominis RepID=D8M2N8_BLAHO 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 2.399e-38
Putative N-terminus
sp_v3.0_unigene151813 SustainPine v3.0 438
• AutoFact: Ribosomal protein L18 n=1 Tax=Ostreococcus tauri RepID=Q011F6_OSTTA 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
C-terminus
sp_v3.0_unigene152328 SustainPine v3.0 433
• AutoFact: PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB992E 0.0
• FL-Next: sp=60S ribosome subunit biogenesis protein NIP7 homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene152400 SustainPine v3.0 334
• AutoFact: [J] COG2016 Predicted RNA-binding protein (contains PUA domain) 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene152411 SustainPine v3.0 516
• AutoFact: ACYPI006857 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WU26_ACYPI 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 2.56e-24
Putative N-terminus
sp_v3.0_unigene152880 SustainPine v3.0 435
• AutoFact: Translation machinery-associated protein, putative n=1 Tax=Pediculus humanus corporis RepID=E0W295_PEDHC 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain