Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene194258 SustainPine v3.0 427
AutoFact: DUF659 domain containing protein 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene194520 SustainPine v3.0 502
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: C2H2 zinc finger protein 1.101e-07
C-terminus
sp_v3.0_unigene194804 SustainPine v3.0 400
AutoFact: DNA binding protein n=1 Tax=Zea mays RepID=B6STU1_MAIZE 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 8.01e-08
C-terminus
sp_v3.0_unigene196280 SustainPine v3.0 119
AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Primula vulgaris] 4.0e-11
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene196875 SustainPine v3.0 321
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9HPN5_POPTR 6.0e-20
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 5.517e-38
Internal
sp_v3.0_unigene197169 SustainPine v3.0 321
AutoFact: protein kinase [Oryza sativa] 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative S-receptor kinase 1.277e-15
Internal
sp_v3.0_unigene197264 SustainPine v3.0 252
AutoFact: Polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3X6_SOLDE 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 2.425e-08
Internal
sp_v3.0_unigene199229 SustainPine v3.0 549
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 5.04467e-44
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.971e-19
Internal
sp_v3.0_unigene199382 SustainPine v3.0 447
AutoFact: Unassigned protein 1.96182e-44
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Putative uncharacterized protein 5.185e-14
C-terminus
sp_v3.0_unigene200393 SustainPine v3.0 349
AutoFact: Shwachman-Bodian-Diamond syndrome protein n=1 Tax=Polysphondylium pallidum RepID=D3B9B9_POLPA 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Shwachman-Bodian-Diamond protein-like protein 2.593e-08
N-terminus
sp_v3.0_unigene200681 SustainPine v3.0 284
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 8.265e-06
N-terminus
sp_v3.0_unigene201593 SustainPine v3.0 342
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene202354 SustainPine v3.0 265
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 1.04e-10
Internal
sp_v3.0_unigene202403 SustainPine v3.0 464
AutoFact: Dimer_Tnp_hAT domain containing protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 2.988e-12
Internal
sp_v3.0_unigene202405 SustainPine v3.0 684
AutoFact: DUF659 domain containing protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene202516 SustainPine v3.0 897
AutoFact: TINY transcription factor n=1 Tax=Arachis hypogaea RepID=E4W7U9_ARAHY 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RAP2-like protein 5.044e-21
Complete
sp_v3.0_unigene202606 SustainPine v3.0 399
AutoFact: DUF659 domain containing protein 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene202936 SustainPine v3.0 474
AutoFact: Dimer_Tnp_hAT domain containing protein 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene203270 SustainPine v3.0 393
AutoFact: DUF659 domain containing protein 7.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene203308 SustainPine v3.0 282
AutoFact: DUF659 domain containing protein 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain