Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene165375 SustainPine v3.0 410
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAB71884.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAO29956.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAQ56798.1| At3g62240 [Arabidopsis thaliana] gb|AEE80326. 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene165595 SustainPine v3.0 364
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
C-terminus
sp_v3.0_unigene165598 SustainPine v3.0 202
AutoFact: DUF659 domain containing protein 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 4.188e-06
Putative C-terminus
sp_v3.0_unigene166195 SustainPine v3.0 375
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166556 SustainPine v3.0 223
AutoFact: Transcription factor AP2 n=1 Tax=Taxus cuspidata RepID=B2CSN5_TAXCU 3.0e-15
FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene166579 SustainPine v3.0 438
AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 3.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene166652 SustainPine v3.0 211
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 6.0e-35
FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Histone acetyltransferase 1.202e-13
Internal
sp_v3.0_unigene166715 SustainPine v3.0 308
AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 4.717e-12
Internal
sp_v3.0_unigene166718 SustainPine v3.0 205
AutoFact: Chain A, Tropinone Reductase-Ii Complexed With Nadph pdb|1IPE|B Chain B, Tropinone Reductase-Ii Complexed With Nadph pdb|1IPF|A Chain A, Tropinone Reductase-Ii Complexed With Nadph And Tropinone pdb|1IPF|B Chain B, Tropinone Reductase-Ii Complexed With Na 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative tropinone reductase 3.60204e-41
N-terminus
sp_v3.0_unigene166748 SustainPine v3.0 366
AutoFact: Homeobox protein HAT3.1, putative n=1 Tax=Ricinus communis RepID=B9SN98_RICCO 8.0e-32
FL-Next: sp=Homeobox protein HAT3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pathogenesis-related homeodomain protein 1.514e-08
Internal
sp_v3.0_unigene166823 SustainPine v3.0 335
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 5.99756e-43
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pathogenesis-related homeodomain protein 2.217e-08
Internal
sp_v3.0_unigene166873 SustainPine v3.0 363
AutoFact: Glutamate receptor n=1 Tax=Ricinus communis RepID=B9S3N7_RICCO 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 2.061e-17
N-terminus
sp_v3.0_unigene166932 SustainPine v3.0 167
AutoFact: DUF659 domain containing protein 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene167061 SustainPine v3.0 382
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA4_POPTR 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 2.389e-36
N-terminus
sp_v3.0_unigene167539 SustainPine v3.0 346
AutoFact: U4/U6.U5 tri-snRNP component [Arabidopsis thaliana] gb|AAK62582.1| AT3g05760/F10A16_5 [Arabidopsis thaliana] gb|AAK96449.1| AT3g05760/F10A16_5 [Arabidopsis thaliana] gb|AEE74293.1| U4/U6.U5 tri-snRNP component [Arabidopsis thaliana] 4.0e-19
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Putative N-terminus
sp_v3.0_unigene168013 SustainPine v3.0 206
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 4.0e-21
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.042e-16
Internal
sp_v3.0_unigene183130 SustainPine v3.0 411
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gb|ABJ17144.1| At3g21310 [Arabidopsis thaliana] gb|AEE76491.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thalia 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183256 SustainPine v3.0 424
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7S4_RICCO 9.0e-10
FL-Next: tr=Nucleic acid binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Nucleic acid binding protein, putative 1.212e-09
Internal
sp_v3.0_unigene183383 SustainPine v3.0 476
AutoFact: Protein dimerization, putative n=1 Tax=Ricinus communis RepID=B9SWK8_RICCO 2.0e-24
FL-Next: tr=Protein dimerization, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene183774 SustainPine v3.0 470
AutoFact: relative of early flowering 6 protein [Arabidopsis thaliana] emb|CAB41155.1| putative zinc finger protein [Arabidopsis thaliana] gb|AAT77779.1| relative of early flowering 6 [Arabidopsis thaliana] gb|AEE78416.1| relative of early flowering 6 protein [Arab 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain