Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

Term: IPR000194  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene160483 SustainPine v3.0 408
• AutoFact: NV19190; similar to pol polyprotein 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.213e-07
N-terminus
sp_v3.0_unigene160837 SustainPine v3.0 432
• AutoFact: kinesin-related protein [Gossypium hirsutum] 1.0e-38
• FL-Next: sp=Kinesin-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Kinesin heavy chain, putative 3.552e-12
Internal
sp_v3.0_unigene160982 SustainPine v3.0 355
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.895e-39
Putative Complete
sp_v3.0_unigene161349 SustainPine v3.0 413
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SMM3_RICCO 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_234, whole genome shotgun sequence 7.803e-07
Putative C-terminus
sp_v3.0_unigene161592 SustainPine v3.0 415
• AutoFact: Kinesin family member 11 n=1 Tax=Arabidopsis thaliana RepID=F4ILV6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin-like protein 2.746e-22
Internal
sp_v3.0_unigene161770 SustainPine v3.0 378
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Petunia x hybrida RepID=Q6VPE8_PETHY 2.0e-24
• FL-Next: tr=Putative gag-pol polyprotein; Petunia hybrida (Petunia). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy sub-class 4.077e-10
Internal
sp_v3.0_unigene161956 SustainPine v3.0 239
• AutoFact: WRKY-type DNA binding protein n=2 Tax=Solanum tuberosum RepID=Q8H9D7_SOLTU 6.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 2.227e-16
Putative C-terminus
sp_v3.0_unigene162222 SustainPine v3.0 322
• AutoFact: Class IV chitinase Chia4-Pa1.3 n=8 Tax=Picea RepID=Q6WSS1_PICAB 3.0e-32
• FL-Next: tr=Class IV chitinase A; Pinus monticola (Western white pine) (Strobus monticola). 0.0
• Sma3: Class IV chitinase 3.24e-23
C-terminus
sp_v3.0_unigene162225 SustainPine v3.0 308
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9T428_RICCO 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 2.078e-29
Internal
sp_v3.0_unigene162789 SustainPine v3.0 165
• AutoFact: MYBR domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ79_MALDO 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 3.077e-25
Internal
sp_v3.0_unigene162817 SustainPine v3.0 409
• AutoFact: Protein SCAR2, putative n=1 Tax=Ricinus communis RepID=B9SL38_RICCO 5.0e-38
• FL-Next: sp=Protein SCAR2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene162829 SustainPine v3.0 392
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 5.0e-30
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Gag-Pol polyprotein 3.298e-14
Putative C-terminus
sp_v3.0_unigene163039 SustainPine v3.0 420
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 1.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene163066 SustainPine v3.0 259
• AutoFact: pfam00078, RVT_1, Reverse transcriptase (RNA-dependent DNA polymerase) 3.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
C-terminus
sp_v3.0_unigene163885 SustainPine v3.0 222
• AutoFact: putative inner membrane protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99855.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Inner membrane protein ALBINO3 9.358e-09
Internal
sp_v3.0_unigene164025 SustainPine v3.0 360
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative retroelement pol polyprotein 9.213e-08
N-terminus
sp_v3.0_unigene164601 SustainPine v3.0 422
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.087e-17
Putative C-terminus
sp_v3.0_unigene164730 SustainPine v3.0 178
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Sciadopitys verticillata RepID=Q56GF7_SCIVE 3.0e-20
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene164865 SustainPine v3.0 261
• AutoFact: P-type ATPase [Hordeum vulgare] 9.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Endoplasmic reticulum [ER]-type calcium ATPase 3.01e-16
Internal
sp_v3.0_unigene165130 SustainPine v3.0 228
• AutoFact: OSJNBa0035O13.13 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XSL7_ORYSJ 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.657e-22
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain