Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene150781 SustainPine v3.0 413
• AutoFact: 26S proteasome non-ATPase regulatory subunit 12 n=1 Tax=Dictyostelium discoideum RepID=PSD12_DICDI 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene151047 SustainPine v3.0 424
• AutoFact: Proteasome 26S non-ATPase subunit 12 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CJ07_9EUKA 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome subunit RPN5b 2.121e-09
Putative Complete
sp_v3.0_unigene151291 SustainPine v3.0 438
• AutoFact: MGC115611 protein n=4 Tax=Xenopus RepID=Q498E8_XENLA 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin protein 9.682e-13
Putative Complete
sp_v3.0_unigene151955 SustainPine v3.0 389
• AutoFact: FKBP-type peptidylprolyl cis-trans isomerase n=1 Tax=Polysphondylium pallidum RepID=D3B9X0_POLPA 5.0e-34
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 9.821e-18
C-terminus
sp_v3.0_unigene152073 SustainPine v3.0 427
• AutoFact: Two-component transcriptional regulator, winged helix family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FEG3_FLAJ1 0.0
• FL-Next: sp=Probable transcriptional regulator ycf27; Guillardia theta (Cryptomonas phi). Plastid; Chloroplast. 0.0
Putative N-terminus
sp_v3.0_unigene152226 SustainPine v3.0 267
• AutoFact: lin-19-like, isoform D [Drosophila melanogaster] ref|NP_724621.1| lin-19-like, isoform A [Drosophila melanogaster] ref|NP_724622.1| lin-19-like, isoform B [Drosophila melanogaster] ref|NP_724623.1| lin-19-like, isoform C [Drosophila melanogaster] sp|Q2431 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene153122 SustainPine v3.0 411
• AutoFact: Putative ArsR-family regulatory protein n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KIJ3_PSEPF 1.0e-19
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene153384 SustainPine v3.0 462
• AutoFact: Cullin C n=1 Tax=Dictyostelium fasciculatum RepID=F4PH56_9MYCE 9.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene153960 SustainPine v3.0 314
• AutoFact: Lupus la ribonucleoprotein n=2 Tax=Aedes aegypti RepID=Q16WW9_AEDAE 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene154920 SustainPine v3.0 378
• AutoFact: COP9 signalosome complex subunit 1 n=1 Tax=Dictyostelium purpureum RepID=F1A0N1_DICPU 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: COP9 signalosome complex subunit 1 3.642e-09
C-terminus
sp_v3.0_unigene155158 SustainPine v3.0 419
• AutoFact: Proteasome component region PCI domain-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q6F9_9MYCE 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: COP9 signalosome complex subunit 4 3.151e-09
Putative C-terminus
sp_v3.0_unigene155493 SustainPine v3.0 470
• AutoFact: 26S proteasome regulatory complex, subunit RPN6/PSMD11 (ISS) [Ostreococcus tauri] emb|CAL52518.1| 26S proteasome regulatory complex, subunit RPN6/PSMD11 (ISS) [Ostreococcus tauri] 8.00141e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157050 SustainPine v3.0 460
• AutoFact: Eukaryotic initiation factor 3e n=3 Tax=Oryza sativa RepID=A0MLT8_ORYSJ 0.0
• FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative eukaryotic translation initiation factor 3E 4.33842e-42
Internal
sp_v3.0_unigene157168 SustainPine v3.0 427
• AutoFact: Cullin n=1 Tax=Chlamydomonas reinhardtii RepID=A8JHY5_CHLRE 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 4.19e-15
Complete
sp_v3.0_unigene157682 SustainPine v3.0 500
• AutoFact: Transcriptional regulator, LysR family n=1 Tax=Ralstonia sp. 5_7_47FAA RepID=E2SV50_9RALS 9.99995e-41
• FL-Next: sp=Probable RuBisCO transcriptional regulator; Thalassiosira pseudonana (Marine diatom) (Cyclotella nana). Plastid; Chloroplast. 0.0
N-terminus
sp_v3.0_unigene157757 SustainPine v3.0 252
• AutoFact: PREDICTED: la-related protein 1-like n=1 Tax=Anolis carolinensis RepID=UPI0002039D50 2.0e-26
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene157794 SustainPine v3.0 568
• AutoFact: DNA-binding response regulator n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KGB4_PSEF5 0.0
• FL-Next: sp=Probable transcriptional regulator ycf27; Guillardia theta (Cryptomonas phi). Plastid; Chloroplast. 0.0
Putative C-terminus
sp_v3.0_unigene158069 SustainPine v3.0 453
• AutoFact: PREDICTED: eukaryotic translation initiation factor 3, subunit 6 48kDa-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA752 0.0
• FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene158243 SustainPine v3.0 232
• AutoFact: HAM group protein n=1 Tax=Dictyostelium discoideum RepID=B0G130_DICDI 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone acetyltransferase 5.949e-25
Internal
sp_v3.0_unigene158584 SustainPine v3.0 509
• AutoFact: Ribosomal protein S2 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C019_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 2.512e-19
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain