Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene143648 SustainPine v3.0 252
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 7.05e-17
Internal
sp_v3.0_unigene143797 SustainPine v3.0 1079
• AutoFact: Caffeic acid O-methyltransferase (Fragment) n=1 Tax=Pinus pinaster RepID=Q9FEU5_PINPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caffeic acid 3-O-methyltransferase 0.0
C-terminus
sp_v3.0_unigene144379 SustainPine v3.0 600
• AutoFact: O-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RW39_RICCO 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene144764 SustainPine v3.0 1073
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene144818 SustainPine v3.0 608
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 3.0e-22
• FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
• Sma3: Histone H1 0.0
Internal
sp_v3.0_unigene145090 SustainPine v3.0 308
• AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTA3_PHYPA 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 linker 5.359e-13
Internal
sp_v3.0_unigene145137 SustainPine v3.0 765
• AutoFact: Histone H1-II n=2 Tax=Volvox carteri RepID=H12_VOLCA 2.0e-06
• FL-Next: sp=Histone H1-II; Volvox carteri (Green alga). 0.0
• Sma3: Histone H1 2.27403e-41
Complete
sp_v3.0_unigene145302 SustainPine v3.0 699
• AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
N-terminus
sp_v3.0_unigene145365 SustainPine v3.0 633
• AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caffeic acid O-methyltransferase 2.036e-31
Putative N-terminus
sp_v3.0_unigene145462 SustainPine v3.0 603
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 9.472e-07
N-terminus
sp_v3.0_unigene145524 SustainPine v3.0 524
• AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RX26_PHYPA 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 8.016e-27
Complete
sp_v3.0_unigene145714 SustainPine v3.0 926
• AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RX26_PHYPA 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 2.24208e-44
Complete
sp_v3.0_unigene145818 SustainPine v3.0 499
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 9.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
N-terminus
sp_v3.0_unigene145946 SustainPine v3.0 429
• AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 1.396e-35
N-terminus
sp_v3.0_unigene147859 SustainPine v3.0 349
• AutoFact: H0512B01.1 protein n=2 Tax=Oryza sativa RepID=Q25AF3_ORYSA 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene148602 SustainPine v3.0 318
• AutoFact: NPH3 domain containing protein 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photoreceptor-interacting protein-like 1.245e-18
Internal
sp_v3.0_unigene148762 SustainPine v3.0 135
• AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor DP, E2 dimerization partner protein 1.408e-08
Internal
sp_v3.0_unigene148911 SustainPine v3.0 337
• AutoFact: NPH3 domain containing protein 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transposon protein Mutator sub-class 2.816e-16
Internal
sp_v3.0_unigene150255 SustainPine v3.0 549
• AutoFact: Histone acetyltransferase ESA1 n=1 Tax=Gibberella zeae PH-1 RepID=ESA1_GIBZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone acetyltransferase 1.461e-15
C-terminus
sp_v3.0_unigene150745 SustainPine v3.0 306
• AutoFact: Two component transcriptional regulator, winged helix family n=2 Tax=Burkholderiales Genera incertae sedis RepID=A2SBU9_METPP 3.0e-34
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain