Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene136425 SustainPine v3.0 297
• AutoFact: Caffeic acid O-methyltransferase (Fragment) n=1 Tax=Pinus pinaster RepID=Q9FEU5_PINPS 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caffeic acid O-methyltransferase 2.687e-40
Internal
sp_v3.0_unigene137016 SustainPine v3.0 467
• AutoFact: 19S proteosome subunit 9 [Arabidopsis thaliana] 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene137682 SustainPine v3.0 203
• AutoFact: Caffeic acid O-3-methyltransferase-like protein (Fragment) n=6 Tax=Pinus taeda RepID=B2CBW1_PINTA 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caffeic acid 3-O-methyltransferase 0.0
Internal
sp_v3.0_unigene137738 SustainPine v3.0 302
• AutoFact: anaphase-promoting complex subunit 2 [Arabidopsis thaliana] sp|Q8H1U5.1|APC2_ARATH RecName: Full=Anaphase-promoting complex subunit 2; AltName: Full=Cyclosome subunit 2 gb|AAN10196.1| APC2 [Arabidopsis thaliana] gb|AEC05853.1| anaphase-promoting complex s 8.0e-35
• FL-Next: sp=Anaphase-promoting complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene138240 SustainPine v3.0 263
• AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene138391 SustainPine v3.0 400
• AutoFact: telomere repeat binding factor 1 [Arabidopsis thaliana] 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Single myb histone 1.82e-18
N-terminus
sp_v3.0_unigene138480 SustainPine v3.0 310
• AutoFact: cullin-like protein1 [Pisum sativum] 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene139691 SustainPine v3.0 238
• AutoFact: Transcription factor DP [Arabidopsis thaliana] sp|Q9FNY2.1|DPB_ARATH RecName: Full=Transcription factor-like protein DPB; AltName: Full=DP-like protein B; Short=AtDPbB; AltName: Full=E2F dimerization partner protein B emb|CAC15484.1| DP-like protein [Arab 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription factor Dp-1 1.042e-08
Internal
sp_v3.0_unigene140114 SustainPine v3.0 391
• AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 1.0e-08
• FL-Next: tr=Caffeic acid O-methyltransferase; Pinus taeda (Loblolly pine). 0.0
C-terminus
sp_v3.0_unigene140568 SustainPine v3.0 577
• AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin-1, putative 1.612e-08
Internal
sp_v3.0_unigene140622 SustainPine v3.0 516
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-20
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
Putative C-terminus
sp_v3.0_unigene140966 SustainPine v3.0 611
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 5.444e-21
N-terminus
sp_v3.0_unigene141318 SustainPine v3.0 736
• AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTA3_PHYPA 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Putative C-terminus
sp_v3.0_unigene142008 SustainPine v3.0 359
• AutoFact: Probable fibrillarin (Fragment) n=2 Tax=Picea RepID=O65058_PICMA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fibrillarin, putative 6.336e-08
Putative N-terminus
sp_v3.0_unigene142257 SustainPine v3.0 1178
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene142749 SustainPine v3.0 470
• AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin-1, putative 1.575e-08
Internal
sp_v3.0_unigene142891 SustainPine v3.0 301
• AutoFact: Putative MYST-like histone acetyltransferase 1 n=12 Tax=Poaceae RepID=MYST1_ORYSJ 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone acetyltransferase 3.995e-15
C-terminus
sp_v3.0_unigene143138 SustainPine v3.0 1186
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Putative Complete
sp_v3.0_unigene143189 SustainPine v3.0 400
• AutoFact: TFIIF_alpha multi-domain protein 2.0e-33
• Sma3: Transcription Factor IIF, Rap30/Rap74, interaction 4.688e-09
coding
sp_v3.0_unigene143319 SustainPine v3.0 762
• AutoFact: Variant of histone H1 n=1 Tax=Lilium longiflorum RepID=Q9ST40_LILLO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain