Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene108607 SustainPine v3.0 193
• AutoFact: E2F transcription factor-like E2FE n=3 Tax=Arabidopsis RepID=E2FE_ARATH 3.0e-12
• FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
Internal
sp_v3.0_unigene108707 SustainPine v3.0 391
• AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein HSF30 9.071e-13
Internal
sp_v3.0_unigene109595 SustainPine v3.0 283
• AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene110148 SustainPine v3.0 349
• AutoFact: caffeic acid O-methyltransferase 4.0e-32
• FL-Next: tr=Caffeic acid O-3-methyltransferase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Caffeic acid 3-O-methyltransferase 0.0
Internal
sp_v3.0_unigene113115 SustainPine v3.0 442
• AutoFact: Meiotic recombination protein SPO11-1 n=2 Tax=Arabidopsis RepID=SPO11_ARATH 0.0
• FL-Next: sp=Meiotic recombination protein SPO11-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene113915 SustainPine v3.0 456
• AutoFact: COP9 signalosome complex subunit 2 [Arabidopsis thaliana] sp|Q8W207.1|CSN2_ARATH RecName: Full=COP9 signalosome complex subunit 2; Short=Signalosome subunit 2; AltName: Full=Protein FUSCA 12 gb|AAL58101.1|AF395058_1 CSN complex subunit 2 [Arabidopsis thal 6.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: COP9 signalosome complex subunit 2 2.893e-13
N-terminus
sp_v3.0_unigene119350 SustainPine v3.0 284
• AutoFact: O-methyltransferase, family 2; Dimerisation n=1 Tax=Medicago truncatula RepID=Q2HTB3_MEDTR 3.0e-23
• FL-Next: tr=Caffeic acid O-methyltransferase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Caffeic acid 3-O-methyltransferase 5.032e-34
Internal
sp_v3.0_unigene119576 SustainPine v3.0 238
• AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9SKU3_RICCO 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transposon protein, putative, Mutator sub-class, expressed 1.671e-06
Internal
sp_v3.0_unigene121918 SustainPine v3.0 520
• AutoFact: NPH3 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transposon protein, putative, Mutator sub-class, expressed 6.035e-13
Internal
sp_v3.0_unigene124789 SustainPine v3.0 412
• AutoFact: cullin-like protein [Oryza sativa Japonica Group] gb|AAQ01196.1| CUL1 [Oryza sativa Japonica Group] 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin 7.054e-08
Internal
sp_v3.0_unigene125331 SustainPine v3.0 247
• AutoFact: Pol protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KB0_CUCME 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene126819 SustainPine v3.0 1238
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene126865 SustainPine v3.0 807
• AutoFact: cullin 1C [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 1.275e-10
Internal
sp_v3.0_unigene126905 SustainPine v3.0 733
• AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin-1, putative 1.575e-08
Internal
sp_v3.0_unigene126933 SustainPine v3.0 1837
• AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_974613.1| uncharacterized protein [Arabidopsis thaliana] emb|CAB36745.1| putative protein [Arabidopsis thaliana] emb|CAB79412.1| putative protein [Arabidopsis thaliana] gb|AAM62860.1| unknown [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene126940 SustainPine v3.0 1390
• AutoFact: replication protein A 30kDa [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative replication factor A 8.543e-09
Complete
sp_v3.0_unigene126974 SustainPine v3.0 1471
• AutoFact: replication protein A 30kDa [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative replication factor A 1.122e-08
Complete
sp_v3.0_unigene127008 SustainPine v3.0 1257
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene127059 SustainPine v3.0 642
• AutoFact: cullin 1A [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin-1, putative 1.687e-08
Internal
sp_v3.0_unigene127330 SustainPine v3.0 1359
• AutoFact: FK506 binding-like protein n=5 Tax=Picea sitchensis RepID=A9P2H9_PICSI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rotamase 1.178e-16
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain