Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene86864 SustainPine v3.0 366
• AutoFact: TT_ORF1 multi-domain protein 2.0e-05
coding
sp_v3.0_unigene94187 SustainPine v3.0 449
• AutoFact: Heat shock transcription factor (HSF) n=3 Tax=Glycine max RepID=Q00M68_SOYBN 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein, putative 2.365e-18
Putative N-terminus
sp_v3.0_unigene94613 SustainPine v3.0 1032
• AutoFact: Caffeic acid O-methyltransferase (Fragment) n=1 Tax=Pinus pinaster RepID=Q9FEU5_PINPS 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caffeic acid 3-O-methyltransferase 0.0
C-terminus
sp_v3.0_unigene94669 SustainPine v3.0 338
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene95192 SustainPine v3.0 1288
• AutoFact: MYB transcription factor MYB107 [Glycine max] 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Single myb histone 4 4.259e-08
Complete
sp_v3.0_unigene96257 SustainPine v3.0 1014
• AutoFact: cullin 3-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 8.198e-18
C-terminus
sp_v3.0_unigene96582 SustainPine v3.0 537
• AutoFact: heat shock transcription factor [Glycine max] 9.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein, putative 1.904e-18
Internal
sp_v3.0_unigene98870 SustainPine v3.0 1437
• AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caffeic acid 3-O-methyltransferase 0.0
Complete
sp_v3.0_unigene100447 SustainPine v3.0 465
• AutoFact: Heat shock transcription factor (HSF) n=3 Tax=Glycine max RepID=Q00M68_SOYBN 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock factor protein, putative 1.201e-18
Putative N-terminus
sp_v3.0_unigene101051 SustainPine v3.0 445
• AutoFact: 19S proteosome subunit 9 [Arabidopsis thaliana] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene102432 SustainPine v3.0 638
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene102649 SustainPine v3.0 555
• AutoFact: transcription initiation factor TFIIF beta subunit [Arabidopsis thaliana] gb|AAF87120.1|AC006434_16 F10A5.27 [Arabidopsis thaliana] gb|AAG40024.1|AF324673_1 At1g75700 [Arabidopsis thaliana] gb|AAG42013.1|AF327423_1 putative transcription initiation factor 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription initiation factor IIF subunit beta, putative 5.167e-09
C-terminus
sp_v3.0_unigene102960 SustainPine v3.0 721
• AutoFact: meiotic recombination protein SPO11-2 [Arabidopsis thaliana] sp|Q9M4A1.1|SPO12_ARATH RecName: Full=Meiotic recombination protein SPO11-2; Short=AtSPO11-2 emb|CAB81545.1| putative topoisomerase VIA [Arabidopsis thaliana] gb|ABE65738.1| DNA topoisomerase VI 0.0
• FL-Next: sp=Meiotic recombination protein SPO11-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative SPO11 protein 2.121e-09
N-terminus
sp_v3.0_unigene103574 SustainPine v3.0 674
• AutoFact: casein kinase [Beta vulgaris] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative casein kinase I 7.298e-25
N-terminus
sp_v3.0_unigene104253 SustainPine v3.0 615
• AutoFact: phototropic-responsive NPH3-like protein [Arabidopsis thaliana] gb|AAG52282.1|AC019018_19 putative non-phototropic hypocotyl; 25081-26618 [Arabidopsis thaliana] gb|AAO00852.1| putative non-phototropic hypocotyl [Arabidopsis thaliana] gb|AAP49519.1| At1g52 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Root phototropism protein, putative 6.805e-07
Internal
sp_v3.0_unigene105542 SustainPine v3.0 783
• AutoFact: O-methyltransferase n=3 Tax=Pinus RepID=O24287_PINRA 7.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caffeic acid O-methyltransferase 0.0
Putative Complete
sp_v3.0_unigene105557 SustainPine v3.0 463
• AutoFact: Os08g0156900 protein n=4 Tax=Oryza sativa RepID=Q6ZD95_ORYSJ 0.0
• FL-Next: sp=Meiotic recombination protein SPO11-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative SPO11 protein 2.258e-09
Internal
sp_v3.0_unigene105611 SustainPine v3.0 529
• AutoFact: Plastid RNA polymerase sigma-subunit n=7 Tax=Arabidopsis RepID=O22057_ARATH 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene108114 SustainPine v3.0 477
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ 3.00004e-41
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Internal
sp_v3.0_unigene108347 SustainPine v3.0 177
• AutoFact: mutant TFIIF-alpha [Arabidopsis thaliana] 6.0e-14
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
• Sma3: Transcription Factor IIF, Rap30/Rap74, interaction 5.379e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain