Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene76374 SustainPine v3.0 306
AutoFact: Caffeic acid O-methyltransferase (Fragment) n=1 Tax=Pinus pinaster RepID=Q9FEU5_PINPS 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Caffeic acid O-methyltransferase 5.75e-10
Internal
sp_v3.0_unigene77076 SustainPine v3.0 169
AutoFact: Heat shock transcription factor (HSF) n=3 Tax=Glycine max RepID=Q00M68_SOYBN 4.0e-07
FL-Next: sp=Heat stress transcription factor B-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene78411 SustainPine v3.0 214
AutoFact: Bergaptol O-methyltransferase n=1 Tax=Ammi majus RepID=BMT_AMMMJ 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Caffeic acid 3-O-methyltransferase 4.239e-15
Internal
sp_v3.0_unigene78688 SustainPine v3.0 190
AutoFact: translation initiation factor eIF-3 subunit 6 [Arabidopsis thaliana] gb|AAG53613.1|AF285832_1 eukaryotic initiation factor 3E subunit [Arabidopsis thaliana] gb|AAK64017.1| putative translation initiation factor 3 [Arabidopsis thaliana] gb|AAL85088.1| puta 1.0e-16
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene78904 SustainPine v3.0 298
AutoFact: putative COP9 signalosome complex subunit 2 [Oryza sativa Japonica Group] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 2 6.859e-13
Internal
sp_v3.0_unigene79600 SustainPine v3.0 147
AutoFact: Caffeic acid O-methyltransferase (Fragment) n=1 Tax=Pinus pinaster RepID=Q9FEU5_PINPS 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80001 SustainPine v3.0 272
AutoFact: Caffeate O-methyltransferase (Fragment) n=8 Tax=Pinaceae RepID=C6FAS3_PSEMZ 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Caffeate O-methyltransferase 2.411e-08
C-terminus
sp_v3.0_unigene80875 SustainPine v3.0 164
AutoFact: transcription factor [Nicotiana tabacum] 2.0e-10
FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Transcription factor E2F 1.126e-17
Internal
sp_v3.0_unigene80894 SustainPine v3.0 88
AutoFact: Plastid CUL1 n=1 Tax=Hevea brasiliensis RepID=D8V3L8_HEVBR 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81070 SustainPine v3.0 206
AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 5.0e-25
FL-Next: tr=Caffeic acid O-3-methyltransferase; Pinus pinaster (Maritime pine). 0.0
Sma3: Caffeic acid 3-O-methyltransferase 0.0
Internal
sp_v3.0_unigene81709 SustainPine v3.0 395
AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
FL-Next: tr=Caffeate O-methyltransferase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Caffeic acid O-3-methyltransferase-like protein 0.0
Internal
sp_v3.0_unigene82081 SustainPine v3.0 515
AutoFact: histone H1/green fluorescent protein S65T variant fusion protein [Expression vector pMF280] 6.0e-14
Sma3: Histone H1 2.274e-21
coding
sp_v3.0_unigene82486 SustainPine v3.0 516
AutoFact: PREDICTED: pro-interleukin-16-like n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI0001DE6B28 5.0e-05
Sma3: Glycine-rich protein A3 1.002e-11
coding
sp_v3.0_unigene83011 SustainPine v3.0 445
coding
sp_v3.0_unigene83462 SustainPine v3.0 254
AutoFact: PREDICTED: similar to hCG1783917, n=1 Tax=Monodelphis domestica RepID=UPI0000F2EA6F 2.0e-05
Sma3: Glycine-rich protein A3 1.859e-15
coding
sp_v3.0_unigene83643 SustainPine v3.0 282
AutoFact: HC2 multi-domain protein 3.0e-08
coding
sp_v3.0_unigene84077 SustainPine v3.0 284
AutoFact: DUF3729 multi-domain protein 1.0e-08
coding
sp_v3.0_unigene85882 SustainPine v3.0 350
AutoFact: TT_ORF1 multi-domain protein 3.0e-09
coding
sp_v3.0_unigene86619 SustainPine v3.0 326
AutoFact: HC2 multi-domain protein 2.0e-11
coding
sp_v3.0_unigene86716 SustainPine v3.0 303
AutoFact: BASP1 multi-domain protein 4.0e-12
Sma3: Histone H1 4.623e-38
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain