Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Winged helix-turn-helix transcription repressor DNA-binding

Term: IPR011991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene50691 SustainPine v3.0 208
• AutoFact: cullin 1C [Nicotiana tabacum] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cullin 6.495e-08
Internal
sp_v3.0_unigene51478 SustainPine v3.0 422
• AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene51977 SustainPine v3.0 301
• AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana] 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene52546 SustainPine v3.0 337
• AutoFact: Histone H1 subtype 7 n=4 Tax=Pisum sativum RepID=Q4A196_PEA 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene53002 SustainPine v3.0 196
• AutoFact: Caffeate O-methyltransferase (Fragment) n=5 Tax=Pinus taeda RepID=Q5IDC8_PINTA 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caffeic acid 3-O-methyltransferase 3.36312e-44
Internal
sp_v3.0_unigene53064 SustainPine v3.0 356
• AutoFact: histone-like protein [Fritillaria liliacea] 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 1.813e-26
Putative N-terminus
sp_v3.0_unigene53199 SustainPine v3.0 429
• AutoFact: Single myb histone 4 n=2 Tax=Zea mays RepID=Q6WLH2_MAIZE 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Single myb histone protein 3.818e-08
Putative N-terminus
sp_v3.0_unigene53979 SustainPine v3.0 405
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.655e-35
Putative N-terminus
sp_v3.0_unigene54144 SustainPine v3.0 177
• AutoFact: histone-like protein [Fritillaria liliacea] 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 4.40568e-42
Putative N-terminus
sp_v3.0_unigene54846 SustainPine v3.0 116
• AutoFact: Eukaryotic translation initiation factor 3 subunit C n=3 Tax=Medicago truncatula RepID=EIF3C_MEDTR 9.0e-10
• FL-Next: sp=Eukaryotic translation initiation factor 3 subunit C; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: eIF3c 4.823e-09
Internal
sp_v3.0_unigene55800 SustainPine v3.0 447
• AutoFact: BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transposon protein, putative, Mutator sub-class, expressed 3.545e-13
Internal
sp_v3.0_unigene55957 SustainPine v3.0 342
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ 3.0e-33
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative C-terminus
sp_v3.0_unigene56162 SustainPine v3.0 381
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9T5R6_PHYPA 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56552 SustainPine v3.0 245
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56699 SustainPine v3.0 464
• AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caffeate O-methyltransferase 2.411e-08
C-terminus
sp_v3.0_unigene57763 SustainPine v3.0 201
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q10HE7_ORYSJ 2.0e-16
• FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.69e-38
Internal
sp_v3.0_unigene57850 SustainPine v3.0 103
• AutoFact: Cullin-3A n=2 Tax=Arabidopsis RepID=CUL3A_ARATH 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58408 SustainPine v3.0 505
• AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene60184 SustainPine v3.0 201
• AutoFact: 26S proteasome regulatory particle non-ATPase subunit6 [Oryza sativa Japonica Group] 3.0e-12
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene60372 SustainPine v3.0 363
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ 2.0e-28
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain