Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L6

Term: IPR000702  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene157030 SustainPine v3.0 428
• AutoFact: putative 60S ribosomal protein L9 [Oryza sativa Japonica Group] gb|EEC72297.1| hypothetical protein OsI_05474 [Oryza sativa Indica Group] gb|EEE56134.1| hypothetical protein OsJ_05010 [Oryza sativa Japonica Group] 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.328e-22
Putative C-terminus
sp_v3.0_unigene157047 SustainPine v3.0 303
• AutoFact: 60S ribosomal protein L9 n=13 Tax=Schizophora RepID=RL9_DROME 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.36e-18
C-terminus
sp_v3.0_unigene158054 SustainPine v3.0 378
• AutoFact: 50S ribosomal protein L6 n=1 Tax=Flavobacterium johnsoniae UW101 RepID=RL6_FLAJ1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L6, chloroplastic 3.657e-08
Internal
sp_v3.0_unigene158413 SustainPine v3.0 169
• AutoFact: Ribosomal protein L9 n=2 Tax=Chlamydomonadales RepID=A8JDP4_CHLRE 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L9 3.251e-07
Internal
sp_v3.0_unigene158487 SustainPine v3.0 298
• AutoFact: Ribosomal protein L9 n=1 Tax=Branchiostoma belcheri RepID=Q8ISP7_BRABE 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RL9, ribosomal protein 9 8.285e-06
Putative N-terminus
sp_v3.0_unigene159209 SustainPine v3.0 179
• AutoFact: 60s ribosomal protein l9 n=1 Tax=Pfiesteria piscicida RepID=E8Z6A8_PFIPI 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 2.34e-11
Internal
sp_v3.0_unigene165647 SustainPine v3.0 153
• AutoFact: L9 n=1 Tax=Suberites domuncula RepID=Q4KTH9_SUBDO 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 1.308e-18
C-terminus
sp_v3.0_unigene165831 SustainPine v3.0 510
• AutoFact: 60S ribosomal protein L9 n=1 Tax=Postia placenta Mad-698-R RepID=B8P339_POSPM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.36e-18
N-terminus
sp_v3.0_unigene167252 SustainPine v3.0 250
• AutoFact: ribosomal protein L9 [Arabidopsis thaliana] 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.173e-18
C-terminus
sp_v3.0_unigene167262 SustainPine v3.0 258
• AutoFact: [J] COG0097 Ribosomal protein L6P/L9E 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RL9, ribosomal protein 9 2.924e-06
N-terminus
sp_v3.0_unigene183750 SustainPine v3.0 463
• AutoFact: 60S ribosomal protein L9 n=9 Tax=Clupeocephala RepID=Q6DRM3_DANRE 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 1.913e-14
N-terminus
sp_v3.0_unigene188950 SustainPine v3.0 642
• AutoFact: 60S ribosomal protein L9 n=12 Tax=Endopterygota RepID=F4WUW7_9HYME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 5.046e-22
Complete
sp_v3.0_unigene189950 SustainPine v3.0 625
• AutoFact: Ribosomal protein L9e n=1 Tax=Artemia franciscana RepID=B0FWQ5_ARTSF 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.554e-18
Putative Complete
sp_v3.0_unigene191867 SustainPine v3.0 519
• AutoFact: 60s ribosomal protein l9 n=1 Tax=Pfiesteria piscicida RepID=E8Z6A8_PFIPI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.36e-18
N-terminus
sp_v3.0_unigene193550 SustainPine v3.0 403
• AutoFact: 60S ribosomal protein L9 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZK2_PHYIT 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 2.649e-14
Internal
sp_v3.0_unigene202820 SustainPine v3.0 463
• AutoFact: 60S ribosomal protein L9-A n=2 Tax=Pyrenophora RepID=B2WG79_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.614e-15
N-terminus
sp_v3.0_unigene203265 SustainPine v3.0 549
• AutoFact: 60s ribosomal protein l9 n=1 Tax=Pfiesteria piscicida RepID=E8Z6A8_PFIPI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.36e-18
N-terminus
sp_v3.0_unigene203345 SustainPine v3.0 200
• AutoFact: Ribosomal protein L9, component of cytosolic 80S ribosome and 60S large subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RVV0_OSTLU 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene204651 SustainPine v3.0 436
• AutoFact: ribosomal protein L9 [Lysiphlebus testaceipes] 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 3.975e-11
N-terminus
sp_v3.0_unigene204713 SustainPine v3.0 622
• AutoFact: putative 60S ribosomal protein L9 [Oryza sativa Japonica Group] gb|EEC72297.1| hypothetical protein OsI_05474 [Oryza sativa Indica Group] gb|EEE56134.1| hypothetical protein OsJ_05010 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.92e-22
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain