Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Rossmann-like alpha/beta/alpha sandwich fold

Term: IPR014729  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene163701 SustainPine v3.0 305
• AutoFact: Tryptophanyl-tRNA synthetase [Danio rerio] 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tryptophanyl-tRNA synthetase, putative, expressed 2.836e-08
Internal
sp_v3.0_unigene164778 SustainPine v3.0 255
• AutoFact: similar to eukaryotic protein kinase domains (Pfam: pkinase.hmm, score: 171.43) [Arabidopsis thaliana] 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 6.864e-16
Internal
sp_v3.0_unigene164997 SustainPine v3.0 311
• AutoFact: Universal stress protein 1561 n=2 Tax=Hordeum vulgare subsp. vulgare RepID=D2XV77_HORVD 9.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene165211 SustainPine v3.0 266
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 6.0e-08
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: E3 ubiquitin ligase 1.791e-15
Internal
sp_v3.0_unigene165709 SustainPine v3.0 321
• AutoFact: Asparagine synthetase n=3 Tax=Pinaceae RepID=E7EAQ2_PINPS 8.0e-36
• FL-Next: sp=Asparagine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Asparagine synthetase 0.0
Internal
sp_v3.0_unigene166049 SustainPine v3.0 351
• AutoFact: Choline-phosphate cytidylyltransferase, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6QXM8_CRYGW 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Choline-phosphate cytidylyltransferase B 1.249e-12
Internal
sp_v3.0_unigene167071 SustainPine v3.0 372
• AutoFact: Subtilisin-like protease n=2 Tax=Arabidopsis RepID=SUBL_ARATH 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Subtilisin-like protease 0.0
Internal
sp_v3.0_unigene167119 SustainPine v3.0 162
• AutoFact: putative tRNA synthetase [Oryza sativa Japonica Group] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamyl-tRNA synthetase 4.155e-07
Internal
sp_v3.0_unigene167425 SustainPine v3.0 152
• AutoFact: Unassigned protein 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene168037 SustainPine v3.0 186
• AutoFact: [L] COG0415 Deoxyribodipyrimidine photolyase 7.0e-08
• FL-Next: sp=Cryptochrome DASH, chloroplastic/mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.439e-08
Internal
sp_v3.0_unigene168241 SustainPine v3.0 151
• AutoFact: Unassigned protein 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene183159 SustainPine v3.0 782
• AutoFact: Tryptophanyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RS09_RICCO 1.0e-23
• FL-Next: tr=Tryptophanyl-tRNA synthetase, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene183215 SustainPine v3.0 864
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RHT2_RICCO 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 6.991e-19
Putative C-terminus
sp_v3.0_unigene183337 SustainPine v3.0 444
• AutoFact: Cryptochrome 1 n=2 Tax=Solanaceae RepID=Q309E8_NICSY 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cryptochrome 2 8.277e-27
Putative N-terminus
sp_v3.0_unigene188296 SustainPine v3.0 216
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T9P1_VITVI 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Choline-phosphate cytidylyltransferase B 1.249e-12
Internal
sp_v3.0_unigene189489 SustainPine v3.0 516
• AutoFact: putative NAD synthetase [Oryza sativa Japonica Group] gb|EAZ02899.1| hypothetical protein OsI_25032 [Oryza sativa Indica Group] gb|EAZ38815.1| hypothetical protein OsJ_23220 [Oryza sativa Japonica Group] 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Carbon nitrogen hydrolase/NAD synthase 4.296e-09
C-terminus
sp_v3.0_unigene190805 SustainPine v3.0 188
• AutoFact: Asparagine synthetase n=1 Tax=Dictyostelium fasciculatum RepID=F4PPY6_9MYCE 3.0e-13
• FL-Next: sp=Asparagine synthetase; Pinus pinaster (Maritime pine). 0.0
Internal
sp_v3.0_unigene191568 SustainPine v3.0 417
• AutoFact: Elongation factor Tu, chloroplastic n=4 Tax=Chattonellaceae RepID=B2XTC8_HETA2 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
Internal
sp_v3.0_unigene195088 SustainPine v3.0 253
• AutoFact: Electron transport oxidoreductase, putative n=1 Tax=Ricinus communis RepID=B9SA46_RICCO 9.0e-21
• FL-Next: sp=Electron transfer flavoprotein subunit alpha, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Electron transfer flavoprotein subunit alpha, mitochondrial 7.196e-09
Internal
sp_v3.0_unigene198753 SustainPine v3.0 114
• AutoFact: (6-4)DNA photolyase n=2 Tax=Oryza sativa RepID=UVR3_ORYSJ 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain