Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene213 SustainPine v3.0 2682
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ankyrin protein kinase-like 5.209e-18
Complete
sp_v3.0_unigene262 SustainPine v3.0 778
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 super family 1.757e-18
Putative N-terminus
sp_v3.0_unigene340 SustainPine v3.0 5840
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.792e-14
Putative Complete
sp_v3.0_unigene364 SustainPine v3.0 3464
AutoFact: PHD-finger, putative [Oryza sativa Japonica Group] gb|ABA92921.1| PHD-finger family protein, expressed [Oryza sativa Japonica Group] 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene417 SustainPine v3.0 1675
AutoFact: histone-lysine N-methyltransferase ATXR6 [Arabidopsis thaliana] sp|Q9FNE9.1|ATXR6_ARATH RecName: Full=Histone-lysine N-methyltransferase ATXR6; AltName: Full=Protein SET DOMAIN GROUP 34; AltName: Full=Trithorax-related protein 6; Short=TRX-related protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone-lysine N-methyltransferase ATXR6, putative 6.584e-09
Complete
sp_v3.0_unigene428 SustainPine v3.0 2732
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 5.152e-24
Complete
sp_v3.0_unigene680 SustainPine v3.0 4309
AutoFact: putative serine/threonine-protein kinase WNK6 [Arabidopsis thaliana] ref|NP_001189928.1| putative serine/threonine-protein kinase WNK6 [Arabidopsis thaliana] sp|Q8S8Y8.1|WNK6_ARATH RecName: Full=Probable serine/threonine-protein kinase WNK6; Short=AtWNK6; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: With no lysine kinase 1.511e-39
Complete
sp_v3.0_unigene709 SustainPine v3.0 3272
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene752 SustainPine v3.0 3626
AutoFact: Sumo ligase, putative n=1 Tax=Ricinus communis RepID=B9SK46_RICCO 0.0
FL-Next: sp=E3 SUMO-protein ligase SIZ1; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene763 SustainPine v3.0 2217
AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein AT4g23860; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene800 SustainPine v3.0 3221
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TE17_PHYPA 0.0
FL-Next: sp=AT-rich interactive domain-containing protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ARID/BRIGHT DNA-binding domain-containing protein 2.308e-08
Complete
sp_v3.0_unigene821 SustainPine v3.0 1917
AutoFact: PHD domain containing protein 1.0e-08
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene917 SustainPine v3.0 2119
AutoFact: Chromodomain helicase DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SCD7_RICCO 9.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.36e-07
Putative Complete
sp_v3.0_unigene947 SustainPine v3.0 3540
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain-containing protein, putative 2.661e-11
Complete
sp_v3.0_unigene983 SustainPine v3.0 3457
AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9R8W9_RICCO 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 1.535e-15
Putative Complete
sp_v3.0_unigene1181 SustainPine v3.0 1442
AutoFact: DUF3594 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1339 SustainPine v3.0 2256
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|ABF57286.1| At1g77250 [Arabidopsis thaliana] gb|AEE35954.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PHD finger protein-like protein 7.797e-06
Putative N-terminus
sp_v3.0_unigene1564 SustainPine v3.0 486
AutoFact: Unassigned protein
FL-Next: sp=BRCT domain-containing protein At4g02110; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene1632 SustainPine v3.0 2655
AutoFact: fimbrin-like protein 2 [Arabidopsis thaliana] sp|Q9FKI0.1|FIMB2_ARATH RecName: Full=Fimbrin-like protein 2 dbj|BAB09267.1| fimbrin [Arabidopsis thaliana] gb|AAK76454.1| putative fimbrin protein [Arabidopsis thaliana] gb|AAN13139.1| putative fimbrin protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbrin, putative 9.399e-13
Complete
sp_v3.0_unigene1675 SustainPine v3.0 3343
AutoFact: PHD domain containing protein 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain