Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene70 SustainPine v3.0 3486
AutoFact: pfam02364, Glucan_synthase, 1,3-beta-glucan synthase component 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1,3-beta-glucan synthase 2.792e-37
Complete
sp_v3.0_unigene78 SustainPine v3.0 2871
AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat family protein, expressed 6.67e-06
Complete
sp_v3.0_unigene87 SustainPine v3.0 1726
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.5e-17
Putative N-terminus
sp_v3.0_unigene124 SustainPine v3.0 1465
unknown
sp_v3.0_unigene128 SustainPine v3.0 2624
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYND finger family protein 6.253e-08
Complete
sp_v3.0_unigene156 SustainPine v3.0 1989
AutoFact: F-box/kelch-repeat protein SKIP6 [Arabidopsis thaliana] sp|Q9SJ04.1|SKIP6_ARATH RecName: Full=F-box/kelch-repeat protein SKIP6; AltName: Full=SKP1-interacting partner 6 gb|AAD20412.1| SKP1 interacting partner 6 (SKIP6), putative [Arabidopsis thaliana] gb| 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene382 SustainPine v3.0 964
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RBJ7_SELML 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene498 SustainPine v3.0 2450
AutoFact: Kelch motif family protein n=3 Tax=Zea mays RepID=B6SZ54_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kelch motif family protein 3.871e-07
Complete
sp_v3.0_unigene525 SustainPine v3.0 3047
AutoFact: RecName: Full=Tubby-like F-box protein 5; Short=OsTLP5; AltName: Full=Tubby-like F-box protein 8; Short=OsTLP8 dbj|BAD08037.1| putative tubby-like protein [Oryza sativa Japonica Group] dbj|BAG89242.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubby protein 2.407e-15
Complete
sp_v3.0_unigene532 SustainPine v3.0 3855
AutoFact: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9RAN8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1,3-beta-glucan synthase 3.351e-37
Complete
sp_v3.0_unigene547 SustainPine v3.0 2147
AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9HCN7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene566 SustainPine v3.0 1944
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q8RWD6.1|FB271_ARATH RecName: Full=F-box protein At5g39450 gb|AAM13163.1| unknown protein [Arabidopsis thaliana] gb|AAP68350.1| At5g39450 [Arabidopsis thaliana] gb|AED94434.1| F-box protein [Arabidopsis thaliana] 0.0
FL-Next: sp=F-box protein At5g39450; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene583 SustainPine v3.0 1993
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_203, whole genome shotgun sequence 1.108e-08
Complete
sp_v3.0_unigene605 SustainPine v3.0 2352
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Transcription factor bHLH49; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BHLH transcription factor 8.684e-15
Complete
sp_v3.0_unigene615 SustainPine v3.0 2514
AutoFact: GCN5-related N-acetyltransferase; BRCT [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene681 SustainPine v3.0 1639
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.754e-19
C-terminus
sp_v3.0_unigene715 SustainPine v3.0 3097
AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat family protein, expressed 6.67e-06
Complete
sp_v3.0_unigene812 SustainPine v3.0 1604
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAN13056.1| unknown protein [Arabidopsis thaliana] gb|AEE84462.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene813 SustainPine v3.0 1775
AutoFact: F-box/WD-40 repeat-containing protein [Arabidopsis thaliana] sp|Q9SV01.2|FBW4_ARATH RecName: Full=F-box/WD-40 repeat-containing protein At3g52030 gb|AEE78876.1| F-box/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene869 SustainPine v3.0 2398
AutoFact: Glutathione synthetase, chloroplastic n=2 Tax=Brassica RepID=GSHB_BRAJU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione synthetase 1.442e-34
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain