Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene166412 SustainPine v3.0 325
• AutoFact: ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SINA6 1.192e-07
Internal
sp_v3.0_unigene166487 SustainPine v3.0 436
• AutoFact: F-box-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E0ZA00_PICSI 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene166597 SustainPine v3.0 469
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene167029 SustainPine v3.0 183
• AutoFact: rve domain containing protein 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.298e-12
Internal
sp_v3.0_unigene167362 SustainPine v3.0 209
• AutoFact: Unassigned protein 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167417 SustainPine v3.0 300
• AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] ref|NP_001077785.1| F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9CAG8.1|FBK28_ARATH RecName: Full=F-box/kelch-repeat protein At1g67480 gb|AAG52295.1|AC011020_2 unknown protein [Arabidopsis thalia 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167421 SustainPine v3.0 302
• AutoFact: Unassigned protein 1.0e-18
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative N-terminus
sp_v3.0_unigene167979 SustainPine v3.0 245
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 5.0e-15
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene168038 SustainPine v3.0 353
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.503e-15
Internal
sp_v3.0_unigene168068 SustainPine v3.0 147
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-08
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Internal
sp_v3.0_unigene168080 SustainPine v3.0 159
• AutoFact: F-box/kelch-repeat protein SKIP6 n=2 Tax=Arabidopsis RepID=SKIP6_ARATH 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168204 SustainPine v3.0 139
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SWC2_RICCO 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168248 SustainPine v3.0 198
• AutoFact: F-box family protein 6.0e-06
• FL-Next: sp=F-box/LRR-repeat protein At1g67190; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene182868 SustainPine v3.0 1091
• AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 1,3-beta-glucan synthase 2.694e-38
Complete
sp_v3.0_unigene182876 SustainPine v3.0 1200
• AutoFact: F-box protein [Arabidopsis thaliana] ref|NP_001190761.1| F-box protein [Arabidopsis thaliana] sp|O49508.1|FB237_ARATH RecName: Full=F-box protein At4g18380 emb|CAA16718.1| hypothetical protein [Arabidopsis thaliana] emb|CAB78840.1| hypothetical protein [A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box domain containing protein 3.718e-16
C-terminus
sp_v3.0_unigene182941 SustainPine v3.0 307
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.805e-33
Internal
sp_v3.0_unigene183141 SustainPine v3.0 510
• AutoFact: RecName: Full=F-box protein SKIP3; AltName: Full=F-box protein PP2-B9; AltName: Full=Protein PHLOEM PROTEIN 2-LIKE B9; AltName: Full=SKP1-interacting partner 3 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene184201 SustainPine v3.0 331
• AutoFact: Late embryogenesis abundant protein n=2 Tax=Picea RepID=Q40861_PICGL 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene184262 SustainPine v3.0 626
• AutoFact: Integrase n=2 Tax=Beta vulgaris RepID=A2I5F8_BETVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.667e-27
Putative C-terminus
sp_v3.0_unigene184514 SustainPine v3.0 562
• AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 9.99995e-41
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain