Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene159816 SustainPine v3.0 143
• AutoFact: cell division control protein 48-B [Arabidopsis thaliana] sp|Q9ZPR1.1|CD48B_ARATH RecName: Full=Cell division control protein 48 homolog B; Short=AtCDC48b gb|AAD20084.1| putative AAA-type ATPase [Arabidopsis thaliana] gb|AAL32521.1| putative AAA-type ATPa 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159832 SustainPine v3.0 485
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.359e-16
Internal
sp_v3.0_unigene159945 SustainPine v3.0 285
• AutoFact: ATP-binding cassette transporter, subfamily B, member 16, group MDR/PGP protein PpABCB16 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKP2_PHYPA 9.0e-34
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene159953 SustainPine v3.0 384
• AutoFact: Serine/threonine-protein kinase AtPK19 , putative [Solanum lycopersicum] 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase AtPK19 4.949e-08
Internal
sp_v3.0_unigene160031 SustainPine v3.0 329
• AutoFact: OSJNBa0059D20.8 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XSK7_ORYSJ 1.0e-19
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
C-terminus
sp_v3.0_unigene160065 SustainPine v3.0 478
• AutoFact: JmjC domain containing protein 5.0e-12
• FL-Next: sp=F-box protein At5g06550; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene160187 SustainPine v3.0 430
• AutoFact: RVT_2 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.932e-34
Internal
sp_v3.0_unigene160257 SustainPine v3.0 355
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.117e-25
Putative N-terminus
sp_v3.0_unigene160291 SustainPine v3.0 328
• AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 5.0e-38
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene160294 SustainPine v3.0 471
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
C-terminus
sp_v3.0_unigene160354 SustainPine v3.0 417
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polyprotein 2.801e-16
Internal
sp_v3.0_unigene160414 SustainPine v3.0 422
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.17e-19
Internal
sp_v3.0_unigene160577 SustainPine v3.0 316
• AutoFact: rve domain containing protein 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.74e-15
Internal
sp_v3.0_unigene160604 SustainPine v3.0 391
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene160721 SustainPine v3.0 462
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.386e-30
Internal
sp_v3.0_unigene160730 SustainPine v3.0 389
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.159e-13
Internal
sp_v3.0_unigene160906 SustainPine v3.0 424
• AutoFact: rve domain containing protein 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161084 SustainPine v3.0 444
• AutoFact: rve domain containing protein 7.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.43e-11
Internal
sp_v3.0_unigene161151 SustainPine v3.0 338
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.046e-17
Internal
sp_v3.0_unigene161195 SustainPine v3.0 424
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.054e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain