Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15975 SustainPine v3.0 1439
• AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] ref|NP_001077785.1| F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9CAG8.1|FBK28_ARATH RecName: Full=F-box/kelch-repeat protein At1g67480 gb|AAG52295.1|AC011020_2 unknown protein [Arabidopsis thalia 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene16051 SustainPine v3.0 3042
• AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 7.867e-13
Complete
sp_v3.0_unigene16058 SustainPine v3.0 515
• AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9FII1.1|FK118_ARATH RecName: Full=F-box/kelch-repeat protein At5g42360 gb|AAK56271.1|AF367282_1 AT5g42360/MDH9_5 [Arabidopsis thaliana] dbj|BAB10477.1| unnamed protein product [Arabidopsis thaliana] gb 8.0e-25
• FL-Next: sp=F-box/kelch-repeat protein At5g42360; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene16261 SustainPine v3.0 1473
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=2 Tax=Malpighiales RepID=B9IFR5_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene16314 SustainPine v3.0 532
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene16560 SustainPine v3.0 638
• AutoFact: Cytochrome P450 A n=1 Tax=Capsicum annuum RepID=E3UTN3_CAPAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 2.796e-20
N-terminus
sp_v3.0_unigene16576 SustainPine v3.0 822
• AutoFact: kelch repeat-containing F-box-like [Oryza sativa Japonica Group] dbj|BAD25009.1| kelch repeat-containing F-box-like [Oryza sativa Japonica Group] 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr9 scaffold_65, whole genome shotgun sequence 1.689e-06
C-terminus
sp_v3.0_unigene16676 SustainPine v3.0 683
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.287e-15
Internal
sp_v3.0_unigene16738 SustainPine v3.0 1377
• AutoFact: Glucan synthase like 3 n=2 Tax=Selaginella moellendorffii RepID=D8QQF0_SELML 0.0
• FL-Next: sp=Callose synthase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 1,3-beta-glucan synthase 1.472e-37
Internal
sp_v3.0_unigene17511 SustainPine v3.0 1273
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17597 SustainPine v3.0 1712
• AutoFact: serine/threonine protein kinase 2 [Arabidopsis thaliana] ref|NP_850543.1| serine/threonine protein kinase 2 [Arabidopsis thaliana] sp|Q39030.2|KPK2_ARATH RecName: Full=Serine/threonine-protein kinase AtPK2/AtPK19; AltName: Full=Ribosomal-protein S6 kinase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase AtPK19 6.836e-08
N-terminus
sp_v3.0_unigene17756 SustainPine v3.0 1416
• AutoFact: F-box multi-domain protein 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18397 SustainPine v3.0 949
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 9.02e-12
C-terminus
sp_v3.0_unigene18909 SustainPine v3.0 1010
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9T5A7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S6 kinase, putative 1.077e-07
N-terminus
sp_v3.0_unigene19079 SustainPine v3.0 460
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700; AltName: Full=Protein DYW9 emb|CAB52443.1| putative protein [Arabidopsis thaliana] emb|CAB79788 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.4013e-45
Putative C-terminus
sp_v3.0_unigene19090 SustainPine v3.0 1463
• AutoFact: F-box-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E0ZA00_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene19185 SustainPine v3.0 678
• AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 2.0e-26
• FL-Next: tr=Putative F-box GID2 protein; Selaginella moellendorffii (Spikemoss). 0.0
Complete
sp_v3.0_unigene19287 SustainPine v3.0 2674
• AutoFact: Protein UNUSUAL FLORAL ORGANS, putative n=1 Tax=Ricinus communis RepID=B9RE08_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kelch motif family protein 1.471e-07
Complete
sp_v3.0_unigene19340 SustainPine v3.0 990
• AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AED97925.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative auxin-independent growth promoter 2.874e-22
C-terminus
sp_v3.0_unigene19352 SustainPine v3.0 999
• AutoFact: kelch repeat-containing F-box-like [Oryza sativa Japonica Group] dbj|BAD25009.1| kelch repeat-containing F-box-like [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain