Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene13513 SustainPine v3.0 1540
AutoFact: serine/threonine-protein kinase AtPK1/AtPK6 [Arabidopsis thaliana] sp|P42818.1|KPK1_ARATH RecName: Full=Serine/threonine-protein kinase AtPK1/AtPK6; AltName: Full=Ribosomal-protein S6 kinase homolog 1 gb|AAG51351.1|AC012562_12 putative ribosomal-protein S 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.483e-11
Complete
sp_v3.0_unigene13621 SustainPine v3.0 2662
AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13680 SustainPine v3.0 429
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9FGN3.1|FB290_ARATH RecName: Full=F-box protein At5g51380 dbj|BAB09749.1| unnamed protein product [Arabidopsis thaliana] gb|AAV84497.1| At5g51380 [Arabidopsis thaliana] gb|AAW30025.1| At5g51380 [Arabidopsis thalian 5.0e-05
FL-Next: sp=F-box protein At5g51380; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene13707 SustainPine v3.0 1423
AutoFact: F-box/LRR-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RD57_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13750 SustainPine v3.0 1692
AutoFact: CjMDR1 n=1 Tax=Coptis japonica RepID=Q94IH6_COPJA 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene13827 SustainPine v3.0 2894
AutoFact: kinesin family member 22 [Arabidopsis thaliana] gb|AAX12877.1| At5g02370 [Arabidopsis thaliana] gb|AED90464.1| kinesin family member 22 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene13839 SustainPine v3.0 4600
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug resistance protein 1, 2, putative 6.97e-34
Complete
sp_v3.0_unigene14375 SustainPine v3.0 2087
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] ref|NP_001077785.1| F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9CAG8.1|FBK28_ARATH RecName: Full=F-box/kelch-repeat protein At1g67480 gb|AAG52295.1|AC011020_2 unknown protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene14686 SustainPine v3.0 286
AutoFact: pfam01535, PPR, PPR repeat 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 8.376e-20
Internal
sp_v3.0_unigene14759 SustainPine v3.0 3337
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Sma3: TIR1-like protein 9.664e-20
Complete
sp_v3.0_unigene14912 SustainPine v3.0 3206
AutoFact: coronatine-insensitive 1 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coronatine-insensitive 1 2.473e-18
Complete
sp_v3.0_unigene14957 SustainPine v3.0 1327
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYND finger family protein 5.521e-08
C-terminus
sp_v3.0_unigene15034 SustainPine v3.0 627
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.887e-12
N-terminus
sp_v3.0_unigene15155 SustainPine v3.0 1622
AutoFact: F-box-like multi-domain protein 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Non-S-locus F-box-like protein 2011 3.899e-06
Complete
sp_v3.0_unigene15432 SustainPine v3.0 1756
AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 1.213e-20
Complete
sp_v3.0_unigene15477 SustainPine v3.0 618
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-30
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.637e-14
Putative Complete
sp_v3.0_unigene15707 SustainPine v3.0 1580
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.80909e-45
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 1.613e-10
C-terminus
sp_v3.0_unigene15765 SustainPine v3.0 1064
AutoFact: coronatine-insensitive 1 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coronatine-insensitive 1 3.401e-14
N-terminus
sp_v3.0_unigene15797 SustainPine v3.0 1487
AutoFact: putative tRNA 2'phosphotransferase [Arabidopsis thaliana] gb|AEC10539.1| putative tRNA 2'phosphotransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene15827 SustainPine v3.0 544
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.354e-14
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain